Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3785 ATGGGTTTTCTCCGGCGACTCTTTGGCGCCAAAAAACCGATCCCTCCCTCTGACGGGTCGGGTAAAAAATCTGATAAAGACAACAAGAGAAGATGGAGCTTTGGCAAACAAAGCAGTAAAACAAAGTCACTCCCACAACCGCCACCCTCCGCCTTCAACCAATTTGATTCCTCCACTCCCTTAGAACGCAACAAACATGCAATCGCCGTTGCTGCGGCAACAGCAGCAGTCGCGGAGGCAGCTCTGGCCGCTGCACATGCTGCGGCGGAGGTGGTCAGACTCACAAGCAGCGGCGTGGCGGGAAGTAGTAACAAAACGCGTGGTCAGTTACGGTTGCCGGAGGAGACCGCCGCCGTTAAAATACAGTCGGCTTTTCGTGGCTATTTGGCAAGGAGAGCGTTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCACTGGTTCGAGGCCACATTGTGAGAAAGAAAACTGCAGATATGCTCAGGCGTATGCAAACATTGGTGCGACTACAGACAAAGGCACGTGCAAGTCGTGCGCACTTGTCATCAGATAATCTGCATTCTTTTAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGAATATGAGCAACCACATCATGTCTATAGTACAAAATTCGGTGGATCTTCCATCCTCAAGAGGTGCAGTTCCAATTCAAATTTTAGGAAGATTGAGTCGGAGAAACCACGGTTTGGCTCCAATTGGTTAGACCATTGGATGCAAGAGAACTCCATTAGCCAAACAAAAAACGCATCATCGAAGAATAGACACCCTGATGAACATAAAAGTGATAAGATTCTCGAAGTAGATACTTGGAAGCCACAGTTGAATAAAAATGAGAATAATGTGAATTCTATGTCAAATGAATCTCCATCAAAACATTCAACAAAAGCTCAAAATCAAAGTCTCTCAGTGAAGTTTCACAAAGCAAAAGAAGAAGTAGCAGCATCGCGCACTGCTGATAATAGTCCACAAACATTTTCTGCTTCTTCAAGAAATGGAAGTGGTGTAAGAAGAAATACCCCCTTTACACCTACAAGAAGTGAGTGTTCATGGAGTTTCTTAGGTGGTTACTCTGGTTACCCTAATTACATGGCAAACACTGAATCTTCTAGAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGCATGAGTTTGAGGAATACAGTTCTACTAGAAGGCCTTTTCAAGGTCTTTGGGATGTAGGGTCTACTAATTCAGACAATGATTCTGATTCAAGGAGCAACAAAGTCTCACCTGCTTTGAGTCGTTTTAATAGAATTGGAAGTAGCAATTTAAGGTGA 1326 0.4442 MGFLRRLFGAKKPIPPSDGSGKKSDKDNKRRWSFGKQSSKTKSLPQPPPSAFNQFDSSTPLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRAHLSSDNLHSFKSSLSHYPVPEEYEQPHHVYSTKFGGSSILKRCSSNSNFRKIESEKPRFGSNWLDHWMQENSISQTKNASSKNRHPDEHKSDKILEVDTWKPQLNKNENNVNSMSNESPSKHSTKAQNQSLSVKFHKAKEEVAASRTADNSPQTFSASSRNGSGVRRNTPFTPTRSECSWSFLGGYSGYPNYMANTESSRAKVRSQSAPRQRHEFEEYSSTRRPFQGLWDVGSTNSDNDSDSRSNKVSPALSRFNRIGSSNLR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3785 441 MobiDBLite consensus disorder prediction 378 441 - -
Mtr1g3785 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 159 IPR027417 -
Mtr1g3785 441 Gene3D - 112 181 - -
Mtr1g3785 441 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Mtr1g3785 441 SMART iq_5 113 135 IPR000048 GO:0005515
Mtr1g3785 441 SMART iq_5 136 157 IPR000048 GO:0005515
Mtr1g3785 441 MobiDBLite consensus disorder prediction 404 441 - -
Mtr1g3785 441 Pfam Protein of unknown function (DUF4005) 330 416 IPR025064 -
Mtr1g3785 441 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 18 34 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 252 352 - -
Mtr1g3785 441 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Mtr1g3785 441 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Mtr1g3785 441 MobiDBLite consensus disorder prediction 1 58 - -
Mtr1g3785 441 PANTHER CALMODULIN-BINDING PROTEIN 1 439 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 324 352 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 259 277 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 37 58 - -
Mtr1g3785 441 MobiDBLite consensus disorder prediction 280 311 - -
Mtr1g3785 441 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3785 Mtr-Chr1 49413128 49418579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3785 1 407 IQD Protein Family AT5G62070 47.086 4.45e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3785 - - gmx:100783694 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3785 1 49413128 49418579 Mtr1g3785 1 49413128 49418579 ECH
Mtr6g1479 6 24681871 24689437 Mtr1g3785 1 49413128 49418579 PCT