Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3748 ATGGAGTTGATAAGGCTAGATTGCATTATTGTTACCATGTTGGCAACACTTTGCCTCTTGTTGCTCTTGATACTCACATTTTCTTGGTGGGTTTTCCCAATCCTAAAACATAAAAAGCTTAAGAGTTGTGGGTTAGGAGGACCAACCCCAAGGTTTCCACTTGGAAACATTGAAGAGATGAAAATAAAAGATAACGTTGCATACTCACATCTATCACATGATATTCACGCTAACGTTTTACCCTACTTTTCTTCTTGGCAAAAATTACATGGTAAGGTGTTCATTTACTGGCTAGGTACGGAACCATTTTTGTACATTGCGGGTGCAGAATTCTTGAAGAAAATGTCAACAGAGGTGATGGCAAAGAGATGGGGGAAGCCAAGTGTTTTTAGAAATGATAGAGAACCTATGTTTGGAAGTGGGTTGGTCATGGTCGAGGGCAATGATTGGGTTCGTCACCGCCACATTATTGCACCAGCATTCAATCCTCTTAACCTCAAGGCCATGGCAAGAACAATGATTGTGTCTACAAATCAAATGATAGATAGATGGACTAGCCAGATAAAATTAGGCAAACATGAAATCGACGTGGAGAAAGAAATTATAGCAACAGCAGGAGAGATCATAGCGAAAACAAGTTTTGGCATGGAAGATGAAAATGCTAGAGAGGTGCTTCACAAATTAAGAACTTTACAAATGACTCTCTTTAACTCCAATAGGTATGTAGGTGTTCCCTTTGGCAAGTATTTTAATGTCAAGAAAAATCTAGAGGCTGAAAAACTTGGCAAAGAAATCGACAGAATCTTGTTGTCTATTGTCGAAGCTCGAAAGAAGTCACTGAAAAACAATTCTTACCAAGATTTATTGAGTTTGTTGCTAAAAGAAAATAGTGATGTTAGCCAATCTGCAAAGACATTAACAACACGAGAAGTAGTTGATGAATGCAAAACTTTCTTCTTTGGTGGACATGAAACAACAGCACTTGCTATCACATGGACTTTGTTGCTTCTTGCTACACATGAAGATTGGCAAAATCAATTAAGAGAAGAGATTAAAGAAGTTGTGGGAAACAATGAGTTTGATGTCACGATGCTTGCTGGTCTAAAGAAGATGAAATGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGACAAGCAAGAGAAGACATTCAAGTTGATGATGTAACAGTGCCTAATGGAACCAACATGTGGATTGATGTAGTAGCGATGCACCATGACCCAGAATTATGGGGAGATGATGTGAATGATTTCAAACCAGAGAGGTTCATGGATGATGTTAATGGTGGATGCAAACACAAGATGGGGTATTTACCTTTTGGATTTGGAGGGAGAATGTGTGTTGGTAGAAACTTGACATTTATGGAGTACAAGATAGTGTTAACAATACTTCTCTCTAACTTCACTTTTAAGGTTTCGCCAGGTTACCATCATTCACCAGCCATCATGCTCTCCCTAAGGCCAGCTCATGGACTTCCTCTCATTGTTCAACCCCTTAATTAG 1539 0.3912 MELIRLDCIIVTMLATLCLLLLLILTFSWWVFPILKHKKLKSCGLGGPTPRFPLGNIEEMKIKDNVAYSHLSHDIHANVLPYFSSWQKLHGKVFIYWLGTEPFLYIAGAEFLKKMSTEVMAKRWGKPSVFRNDREPMFGSGLVMVEGNDWVRHRHIIAPAFNPLNLKAMARTMIVSTNQMIDRWTSQIKLGKHEIDVEKEIIATAGEIIAKTSFGMEDENAREVLHKLRTLQMTLFNSNRYVGVPFGKYFNVKKNLEAEKLGKEIDRILLSIVEARKKSLKNNSYQDLLSLLLKENSDVSQSAKTLTTREVVDECKTFFFGGHETTALAITWTLLLLATHEDWQNQLREEIKEVVGNNEFDVTMLAGLKKMKWVMNEVLRLYPPAPNVQRQAREDIQVDDVTVPNGTNMWIDVVAMHHDPELWGDDVNDFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTILLSNFTFKVSPGYHHSPAIMLSLRPAHGLPLIVQPLN* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3748 512 Pfam Cytochrome P450 76 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 SUPERFAMILY Cytochrome P450 74 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3748 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 506 - -
Mtr1g3748 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Mtr1g3748 512 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 8 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3748 Mtr-Chr1 49064797 49067678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3748 2 511 Cytochrome P450 AT5G52400 58.462 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3748 - - gmx:100785284 824.698