Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3745 ATGATTCATAATTCGTTTTCTGTTACGATGAACTTCGCGGTGGCGTTTGCATTATTCTATCTAATCACGGTGGAGTCATGGCGTGTTCACTCACAAGAACCGAAGAAGCTTTATGTGAACATGACTCTCGTTAACAACGCACGCGAAACCGGTGCTTTTTGTTTGGATGGAAGTTTACCGGCGTATCATTTGGATAGAGGATTTGGAGCTGGTGAAGACAATTGGCTTCTACAATTTGAGGGAGGTGGTTGGTGCAATGACTTGAAATCATGCTTGGAGAGAGCAAAAACTCGCAGGGGTTCAACAAATTACATGACCAAATATGAGACCTTCAATGGTATTTTAAGCAACAATGCTACCGTTAATCCAGACTTTTACAATTGGAACAGGGTGAAGCTGAGATACTGTGATGGAGCTTCATTTACTGGAAACAGAGTGTTCAATAATGGGACAACAAAGCTTTACTTCAAAGGGCAAAATATTTGGGAAGCCATTATTGCCGACATTCTGCCAAAAGGTTTAGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGCTCAGCAGGAGGTTTGGCCACCTTTCACCATTGTGACAATTTCACCAAGTATTTGCCAACCAATGCTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAACCACACCATGAGATACTTTTTCAAAAGTGTAGTTACGTTGCAGGGGTCAGTACAGAACCTGAATAAAAACTGCACCAGTGCAATGTCTTCTTATCCAGACCTGTGCTTCTTTCCACAATATGTGTTGAAATATATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATAATATATTGGTGCCACCTTCAGCTGATCCCCACGGGCACTGGAACCATTGCAAGAAGGACCCAGCGGCATGCACACCAACCGAAATTAATACATTGCAAGGTTTTAGGCTCAGCATGATTGCAGCTTCGAAACCCATCTACTTTTATTCAAACAGAGGGGGAATATTTATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGATACATGGTCTGGAGCTGATTCTCCAAGAATAATAAACACGACTATTGCAGAGGCAGTCGGTGATTGGTATTTTTGTAGAAACAAAAGCAAGGCAATAGACTGGCCATATCCATGCGATACAACTTGTCGTAATTTGATACCTGTATTACATAATTTAATACCTTAA 1242 0.4098 MIHNSFSVTMNFAVAFALFYLITVESWRVHSQEPKKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGEDNWLLQFEGGGWCNDLKSCLERAKTRRGSTNYMTKYETFNGILSNNATVNPDFYNWNRVKLRYCDGASFTGNRVFNNGTTKLYFKGQNIWEAIIADILPKGLGKARKALLSGCSAGGLATFHHCDNFTKYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFFKSVVTLQGSVQNLNKNCTSAMSSYPDLCFFPQYVLKYISTPYFILNSAYDVFQFHNILVPPSADPHGHWNHCKKDPAACTPTEINTLQGFRLSMIAASKPIYFYSNRGGIFINSCFAHCQSESQDTWSGADSPRIINTTIAEAVGDWYFCRNKSKAIDWPYPCDTTCRNLIPVLHNLIP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3745 413 PANTHER PECTIN ACETYLESTERASE 9 31 406 - -
Mtr1g3745 413 Pfam Pectinacetylesterase 33 387 IPR004963 GO:0016787
Mtr1g3745 413 PANTHER NOTUM-RELATED 31 406 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3745 Mtr-Chr1 49026118 49036380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3745 31 407 Carbohydrate Esterase AT5G23870 66.402 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3745 K19882 - gmx:100802358 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3745 1 49026118 49036380 Mtr1g3745 1 49026118 49036380 ECH