Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3744 ATGATTCATAATTCGTTTTCTGTTACGATGAACTTCGCGGTGGCGTTTGCATTATTCTATCTAATCACGGTGGAGTCATGGCGTGTTCACTCACAAGAACCGAAGAAGCTTTATGTGAACATGACTCTCGTTAACAACGCACGCGAAACCGGTGCTTTTTGTTTGGATGGAAGTTTACCGGCGTATCATTTGGATAGAGGATTTGGAGCTGGTGAAGACAATTGGCTTCTACAATTTGAGGGAGGTGGTTGGTGCAATGACTTGAAATCATGCTTGGAGAGAGCAAAAACTCGCAGGGGTTCAACAAATTACATGACCAAATATGAGACCTTCAATGGTATTTTAAGCAACAATGCTACCGTTAATCCAGACTTTTACAATTGGAACAGGGTGAAGCTGAGATACTGTGATGGAGCTTCATTTACGGGAAACAAAGTGTTCAATAATGGGACAACAAAGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCCTTATTGCCGACCTTCTGCCAAAAGGTTTAGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGCTCAGCAGGAGGTTTGGCCACCTTTCACCATTGTGACAATTTCACCAAGTATTTGCCAACCAATGCTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAACCACACCATGAGATACTTTTTCAAAAGTGTAGTTAGGTTGCAGGGGTCAGTACAGAACTTGAATAAAAATTGCACCAGTGCGATGCCTTCTTATCCAGACCTATGCTTCTTTCCACAATATGTGTTGAAATATATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATAATATATTGGTGCCACCTTCAACTGATCCCCGCGGGCACTGGATCCACTGCAAGAAGGACCCAGCGGCATGCACACCAACCGAAATTAATACATTGCAAGGTTTTAGGCTCAGCATGATTGCTGCTTTGAAACCCTTCTACTTTTATTCAAACAGCGGGGGAATGTTTATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCACAAGATACATGGTCTGGAGCTGATTCTCCAAAAATAAAAAACACGACTATTGCAGAAGCAGTCGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGGCAATAGACTGTCCATATCCATGTGATACAACTTGTCGTAATTTGATACCTGCACCTGCATTACATAATTTAATACCTTAA 1248 0.4119 MIHNSFSVTMNFAVAFALFYLITVESWRVHSQEPKKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGEDNWLLQFEGGGWCNDLKSCLERAKTRRGSTNYMTKYETFNGILSNNATVNPDFYNWNRVKLRYCDGASFTGNKVFNNGTTKLYFKGQKIWEALIADLLPKGLGKARKALLSGCSAGGLATFHHCDNFTKYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFFKSVVRLQGSVQNLNKNCTSAMPSYPDLCFFPQYVLKYISTPYFILNSAYDVFQFHNILVPPSTDPRGHWIHCKKDPAACTPTEINTLQGFRLSMIAALKPFYFYSNSGGMFINSCFAHCQSESQDTWSGADSPKIKNTTIAEAVGDWYFSRNRSKAIDCPYPCDTTCRNLIPAPALHNLIP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3744 415 PANTHER NOTUM-RELATED 31 406 IPR004963 GO:0016787
Mtr1g3744 415 Pfam Pectinacetylesterase 33 386 IPR004963 GO:0016787
Mtr1g3744 415 PANTHER PECTIN ACETYLESTERASE 9 31 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3744 Mtr-Chr1 49009867 49021240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3744 31 407 Carbohydrate Esterase AT5G23870 66.667 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3744 K19882 - gmx:100802358 658.677