Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3741 ATGGCTCCTAAACAACCAAGTACGGGTCTGTTTGTTGGATTGAACAAAGGCCACATCGTCACCAAGAAGGAATTGGCTCCACGTCCTTCAGCTCGCAAGGGGAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATCAGAGAGGTTGCTGGGTTTGCACCTTATGAGAAGCGTATAACTGAGTTGCTCAAGGTTGGAAAAGACAAGAGGGCGCTTAAGGTTGCAAAGAGAAAGCTTGGAACCCACAAGCGTGCAAAGAAGAAGAGAGAGGAGATGTCTAATGTCCTCAGGAAGATGAGGGCTGGTGGTGGAGCAGGAGATAAGAAGAAATAG 336 0.4821 MAPKQPSTGLFVGLNKGHIVTKKELAPRPSARKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGAGDKKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3741 111 MobiDBLite consensus disorder prediction 87 111 - -
Mtr1g3741 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Mtr1g3741 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Mtr1g3741 111 MobiDBLite consensus disorder prediction 79 111 - -
Mtr1g3741 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Mtr1g3741 111 Gene3D 60S ribosomal protein L36 1 105 IPR038097 -
Mtr1g3741 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3741 Mtr-Chr1 48979205 48980731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3741 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.180 3.37e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3741 K02920 - zju:107414508 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3741 1 48979205 48980731 Mtr6g1352 6 20802127 20804492 ECH
Mtr1g3741 1 48979205 48980731 Mtr1g3741 1 48979205 48980731 ECH