Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3739 ATGGCAGATTTCGCCGGACGAAAAGCTACCGCCGCTAGAAAAGCCGCCGCTGCCGCTGCTAACGCTACCGCTACGACGTCGTTTTCATTCCTCTTCTCCAGAAACTGCATTATGGATATTGATGAAATCCTTAGTATTTTCCAAGAACGAGACCACACTGCAATTGGTGGGAGTGAATCTGAGGGTTCAAGTAACCGCTCTTTATCGGAGAGTGATGGTTGTTCTCCCGGAGAAGATTTTGAAGAGACTAACGAAGAGGGCGTAGGATGCAATTTTAAAGATGAAACTGCCGTGGACTCGGTTACTGATTTAGAGAAAATTAATTTCAAAGAAACAAGTATTGAGAACTTAATGAGGTATCATTTTCCAGATCGTGAAGTTGCCTTCATGTTCTACAATTGGTATGGGTGTTTTCATGGATTTGCGGCTAGAAAGAGCAGACTGATTAGAAATATTAATGGTGAAGTGGTTCAACAAACATTTCTTTGTCATAGGGAAGGAATTAGGGAGGAAAAGTACATCAATTCAACATCTCGTAAGAGAGAACACAAACCATTGAGTAGGTGCGGATGTCAAGCTAAAGTACGAGTTCACATTGATGTGAGTTCCCAACGTTGGTACATTAAACTCTTTGATGATGACCATAACCATTCCTTTGTCAAGGAAAAATTTGAGAGGATGCTTCCTGCACATAGGAAGATGAGCGAGTATGACAAATACCAGATGAACACAATGAGGCAATCAGGAATTTCAACGACCCGAATTCATGGTTATTTTGCGTCTCAAGCTGGTGGGTATCAAAATGTTGGTTACAATCGAAGAGACATGTATAACGAGCAAAGGAAGAGACGTATGCGTTGGAATTCTGATGCTGAACAAGCTGTAAATTTTTTGAAGCATATGTCATCGAAGGACGATATGATGTTTTGGAGGCACACGGTTCATGCAGATGGTTCACTCCAACATCTGTTTTGGTGTGACGGTGTCAGTTGTATGGACTACTCCATTTTTGGTGATGTGTTGGCCTTTGATGCAACTTATAAGAAAATAAAATACAATACACCGTTAGTCATATTCTCTGGAGTAAATCATCATAATCAGAGCATTATTTTCGGAAGTGCAATTATTGGTGATGAAACTGAAGACACGTATGTTTGGCTTTTGAAGATTTTTGTTGAAGCGATGGGAGGGAAACTTCCGGTCTCGGTCATTACTGATGGAGATTTGTCGATGAGAAATGCAATAAGAAAAGTTTTTCCAGAAGCACATCATCGTCTTTGTGCTTGGCATCTGATACGAAACGCCACTAGCAACATAAAAAACCTTCACTTTGTTTCAAAGTTTAAAGATTGCTTGTTAGGTGACGTGGATGTTGATGTGTTTCAGCGTAAGTGGGAAGAACTAGTTACAGAATTTGGCTTGGAAGAAAACCCCTGGATGTTGGAGATGTATCAAAAGCGGAAGATGTGGGCAGCTGCTCATTTTCGCGGTAAATTTTTTGCTGGTTTTAGAACAACTTCTCGATGTGAAGGTTTGCATTCTGAATTTGGAAAATATGTATCAGCTCTAACCAACTTACATGATTTTTTTCAACAATTTTTTCGTTGGTTGAATTACATGAGATATAGAGAGATAGAGGCTGATTTTTCATCTTCTCATGGTGATATTGTCGTTCAAACTCAACACCATCATTTAGAGAGATCAGCCTTTAAGTTGTACACAAAGACAATCTTTAGGCTATTCAGAAAGGTGTTAGAAAGAGCATGTCGCTTTGACGTACATATTGTATCACAAAATGGTTCCATTCACAACCACATTGTGCGTAGATATCCTAGACAAGATATTGAATGGACAGTTTCATATTGTGAGCATAGGTTCACTTTGGTGGATCTGCAACTTCATAAAACACAAAACACATTTGCAAATGAGAGATTGAAAATGAAAGTGTTTTCATGGAAATGTTATTGA 1968 0.3928 MADFAGRKATAARKAAAAAANATATTSFSFLFSRNCIMDIDEILSIFQERDHTAIGGSESEGSSNRSLSESDGCSPGEDFEETNEEGVGCNFKDETAVDSVTDLEKINFKETSIENLMRYHFPDREVAFMFYNWYGCFHGFAARKSRLIRNINGEVVQQTFLCHREGIREEKYINSTSRKREHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHLIRNATSNIKNLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRFTLVDLQLHKTQNTFANERLKMKVFSWKCY* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3739 655 PANTHER OS02G0262500 PROTEIN 116 605 - -
Mtr1g3739 655 MobiDBLite consensus disorder prediction 57 72 - -
Mtr1g3739 655 MobiDBLite consensus disorder prediction 55 86 - -
Mtr1g3739 655 Pfam MULE transposase domain 340 434 IPR018289 -
Mtr1g3739 655 Pfam FAR1 DNA-binding domain 131 220 IPR004330 -
Mtr1g3739 655 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 116 605 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3739 Mtr-Chr1 48963856 48970419 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g3739 MULE 4.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3739 - - ccaj:109791994 556.984