Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3732 ATGCCAGTTGCAAAACTTACTGCCTCAGCTACTCCCAATTTTATGAAACCGGAAGTCGGAAATGATTCTTTGGATACATTGATAAGACAAGCGGTTGGAAAAGAACCATTCCTTTCCTTTCCTAGGGCTGGTGGTGACAGGCCAGCACAGTGGATTCAATTATTTCATGCTTTAGAACAGCAACAAGAAATTCCAGGGTGGCCTCTGTTCTCTCCTGCAAAGGTTCAACTACTAAAGTGTGACAAGTGTACCAAAGACAGAGAGTTTTGTTCACCCATTAATTATAGAAGGCATAAACGTGTACACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAGATAAGTAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTGTCATTTGAGAATGTGATGTTGGAGGAGGTTCCAGGGTCTTCAATTGTACAAGCTCTCTCAACTCTTAGAACACAACAAGGATTTTACTCTTTTCCACAGTATTATCTCAGGGCTGGTTTCTCCCTTTTGGATATTGTTCAATCCAGGCCTTCTAGTTTTCCTATATCTTCCCAAAAGTTGTTCAATATTCTCGATGATTCCAGTGAAAATACATTTTTATGTGGAACAGCAGTGTCAATGCAAAGACATGTTTTTGATGGAGAGGCTGAAAAGATTGGGCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTAAAGGCGTGGCTGGCAGACAAAGATGCCGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAGAGAAGACAAGCAGAGGTTTTGGAGAGAAAACGCATGAAAAAGCTTAGGCTTAAAGAACAAAAGGCGAGGGACCAACTTGAAAATGACGTAGAAGTTAAAGGGAGCATCAGAAGTGCAGGAGAGGAGGTATCGCCGGAGGAACCATCTTTGGCTGCATGTGACTTTGAAGCTCATAGAGCACATGCATTTGCTGATCAAGCTTCTTCACCACATGTAACTTATCATTGCCCAGACACCAATGAAGGTGTAGATGAGGATACACAGTTAGCATATGATTGTGACACTAATCAGAATGTGGAGCCACAGACATTTAAATCGGATGCACAGTCAGGTTATGAATGTGACACTGATCGGAATTTAGAGAGACAAACATCACACAGACATAATCCTCGACGCATAATGACTGCCAGATGGCTAAGGCATCCTAAGTCGCAAAGTACTATTGTCAATGGTTTGCATGCAAGCCAAAACTCTCAAAAGTCTAAGTCTGGAGTCATTCCAAAATATGGAAATGGAACCAACCGTGATCAAAGGGTAGCTCCTATAGTTAATAGTGGTAAAGTTTGGAGCCGGAAACCTAAACCAGAAATAGATACAGTGATTTTAAAACCCAAACTGCACAAAGAACCAGATGAAGTTAAGACTCACGAAGTTTTGATTGGATCTGTATCTGTTACATTGGTCAATTGCAGCCAATCAGAGAATAATCTTGTCACATCTCAAGCAAACAGCTTCATAGAGAATTTGGCAAACCAAAATATTGCTCAGGAGAAGCCAATTAAACCTGACTCCTTTCATGGAGGCAACAATCAGTCAGGAGTTAAGCTTTGGAGACCGGTGAGCCAGCACGAAACTAAAAATCCACCGCCACTTCAAAGTGCTGAGACAGAAGTTGATGTAGTCCATGGAAATGCTGATCAAAATTTGTCATTGCAAAGTAATTTAAGGTTGTGTGATATAGATGGAGGCAATATGGGTTATGGGAACAAATCTCACGTCGGGCCAAAAGCAGATTCAGAAGGCTTTCGGTTGTCCAGTGATGCTGCAAAAGCCTTTCTTGGACAAAGATGGAAAGAAGCAATTTCGTCACATCATGTGGAATTAGTTATTTCACCTGATTCAGAAACTCATGGGTTCAAACCAGTTAAGGATTGCGCAACATCGGTTGCTAAATCCAAACCTAGAATGAGGCCTGATAAAGGAATCAAGATAAAGTACATTCCAAGACTAAAAGCTGCAGCATAA 2064 0.4167 MPVAKLTASATPNFMKPEVGNDSLDTLIRQAVGKEPFLSFPRAGGDRPAQWIQLFHALEQQQEIPGWPLFSPAKVQLLKCDKCTKDREFCSPINYRRHKRVHHRLKKLDKDSKISRDLLGAYWDKLSVEEAKEVVSFENVMLEEVPGSSIVQALSTLRTQQGFYSFPQYYLRAGFSLLDIVQSRPSSFPISSQKLFNILDDSSENTFLCGTAVSMQRHVFDGEAEKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQRRQAEVLERKRMKKLRLKEQKARDQLENDVEVKGSIRSAGEEVSPEEPSLAACDFEAHRAHAFADQASSPHVTYHCPDTNEGVDEDTQLAYDCDTNQNVEPQTFKSDAQSGYECDTDRNLERQTSHRHNPRRIMTARWLRHPKSQSTIVNGLHASQNSQKSKSGVIPKYGNGTNRDQRVAPIVNSGKVWSRKPKPEIDTVILKPKLHKEPDEVKTHEVLIGSVSVTLVNCSQSENNLVTSQANSFIENLANQNIAQEKPIKPDSFHGGNNQSGVKLWRPVSQHETKNPPPLQSAETEVDVVHGNADQNLSLQSNLRLCDIDGGNMGYGNKSHVGPKADSEGFRLSSDAAKAFLGQRWKEAISSHHVELVISPDSETHGFKPVKDCATSVAKSKPRMRPDKGIKIKYIPRLKAAA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3732 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 684 - -
Mtr1g3732 687 MobiDBLite consensus disorder prediction 427 443 - -
Mtr1g3732 687 MobiDBLite consensus disorder prediction 427 450 - -
Mtr1g3732 687 Coils Coil 282 302 - -
Mtr1g3732 687 MobiDBLite consensus disorder prediction 299 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3732 Mtr-Chr1 48896758 48903127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3732 20 682 C2H2 Transcription Factor Family AT4G25610 40.909 3.67e-139 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr1g3732 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3732 - - cam:101491132 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3732 1 48896758 48903127 Mtr1g3732 1 48896758 48903127 ECH