Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3724 ATGCCTACATGGTGGGGAAAATCATCATCGAAAGAAACCAAGAAGAAAGCAGGTAAGGAAAGTATTATTGACACATTGCACAGAAAATTTAAATTTCCATCTGAGGGTAAACGAAGCACTATATCTGGAGGATCTCGTAGACGAAGCAATGACACAATTTCAGAGAAGGGGGACCGTTCTCCATCTGAATCAAGATCCCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAACCCCTTCCACTTCCGGATTTGCACCCTTCAAGTTTAGGTCGAGTTGATTCTGAAATTAGTATATCAGCGAAATCAAGACTGGAAAAGCCCTCCAAGCCGTCATTATTTCTTCCACTTCCAAAACCTTCATGCATACGTTGTGGGCCAACTCCTGCAGATTTAGATGGAGATATGGTCAATGCTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGACGAGCCAGCAGACTCACGCAACCGTAGTCCTCTGGCAACTGACTCGGAAACTGGTACAAGAACTGCTGCCGGCAGTCCTTCCAGCTTGGTGCTCAAGGATCAATCATCTGCTGTTTCCCAACCGAATTTGAGAGAAGTAAAAAAAACGGCAAACATTCTCAGTAATCACACACCTTCTACTTCACCAAAACGGAAGCCATTACGCCACCATGTTCCAAATCTTCAAGTTCCACCTCATGGTGTCTTCTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCGTTGAGGGCATTTGGTACAGATCAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGCCATATCCAGAGATCAATTTCGTCGGATCTGGCCACTGCTCTAGTCCAGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAATACCTAGCCCTAGAATGACTAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCAGGGGGAACACCAACTGAATCACAGACAGGACGGGCTGATGATGGAAAACAACAAAGTCATCGTTTGCCCCTCCCTCCTTTAACAGTTACCAATACCTCGCCATTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCGAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGGTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGAACATTTGGGCACGTCTATATTGGCTTCAATAGTCAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTTTGGAAAGTGCTAAGCAATTGATGCAGGAAGTTCATTTATTAAGCCGTTTAAGACATCCAAATATTGTGCAGTATTATGGCTCTGAAACAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGTTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATTCGAAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTTCACAGGGACATCAAAGGAGCAAACATATTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATACTGTCCATTGTCGTTCAAAGGAAGTCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCCAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACGAAGCCTCCTTGGTCACAGTATGAAGGGGTTGCTGCCATGTTCAAAATTGGTAACAGCAAGGAGCTCCCAACAATTCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGAATTATTAGACCACCCTTTTGTAAAAGGTGCTGCACCTTTGGAAAGACCTATTATGGTTCCCGAAGCTTCAGACCCTATTACTGGAATTACACATGGAACAAAAGCTCTGGGCATTGGACAAGGAAGGAATCTGTCTGCCTTGGATTCAGATAAACTCTTGGTTCATTCTTCTAGGGTTTTGAAAAATAATCCTCATGAAAGTGAAATCCATATTCAAAGGAATATATCTTGCCCAGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCAGAGGAGTGGGAGATTGTCTCCTTCTCCTATATCTAGCCCTCGGACCGCTTCTGGTGCATCCACGCCTCTCACTGGCGGCAGTGGTGCCATTCCATTCAGTAACCACTTAAAACAATCAGTTTACTTTCAAGAGTGTCTCGGAAGCATGCCGAAATCCCCAAATGGTGTCTATATTAACGGCTCTTCTCACCACGATTCAAATATCGACATTTTTCAAAGAATGCAAGCCGGGTCTCACATTAAATCAGAACTAGTCTCCAGTGATAATGATGCTCTTGGCAAGCAGTTCGTAAGGTCTCCTCATGCAGAACCGTATGACTTTCAGTCGGTCTTAGCTGATCGTGTTGGCCGGCAGCTTCTGGGGGATCATGTTAAGATTAACCCATCATTTGATCCAAGTCCCAGCTCGTCGATGCTCAACCGGACAAATGGTTTATGA 2700 0.4433 MPTWWGKSSSKETKKKAGKESIIDTLHRKFKFPSEGKRSTISGGSRRRSNDTISEKGDRSPSESRSPSPSKVARCQSFAERPHAQPLPLPDLHPSSLGRVDSEISISAKSRLEKPSKPSLFLPLPKPSCIRCGPTPADLDGDMVNASVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLVLKDQSSAVSQPNLREVKKTANILSNHTPSTSPKRKPLRHHVPNLQVPPHGVFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEINFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPIPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTGRADDGKQQSHRLPLPPLTVTNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSQSGEMCAMKEVTLFSDDAKSLESAKQLMQEVHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPEASDPITGITHGTKALGIGQGRNLSALDSDKLLVHSSRVLKNNPHESEIHIQRNISCPVSPIGSPLLRSRSPQQRSGRLSPSPISSPRTASGASTPLTGGSGAIPFSNHLKQSVYFQECLGSMPKSPNGVYINGSSHHDSNIDIFQRMQAGSHIKSELVSSDNDALGKQFVRSPHAEPYDFQSVLADRVGRQLLGDHVKINPSFDPSPSSSMLNRTNGL* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3724 899 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3724 899 MobiDBLite consensus disorder prediction 286 412 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 1 100 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 742 780 - -
Mtr1g3724 899 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3724 899 MobiDBLite consensus disorder prediction 165 218 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 286 300 - -
Mtr1g3724 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 811 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 880 899 - -
Mtr1g3724 899 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Mtr1g3724 899 Gene3D Transferase(Phosphotransferase) domain 1 408 684 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 149 253 - -
Mtr1g3724 899 SUPERFAMILY Protein kinase-like (PK-like) 409 668 IPR011009 -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 746 780 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 9 62 - -
Mtr1g3724 899 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 811 - -
Mtr1g3724 899 CDD STKc_MEKK1_plant 410 667 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 370 404 - -
Mtr1g3724 899 MobiDBLite consensus disorder prediction 883 899 - -
Mtr1g3724 899 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3724 899 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3724 Mtr-Chr1 48822891 48830045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3724 1 897 MAP Kinase Kinase Kinase AT1G63700 58.093 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr1g3724 Pkinase 8.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3724 K20717 - gmx:100797994 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3724 1 48822891 48830045 Mtr1g3724 1 48822891 48830045 ECH