Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3713 ATGAGTCACATGAGTTTTCCTCACAAACTTCAACAACTCAAAAGACCAAACCCTTCTTTCATGGAGACACAAAACCTTATCCTTTTCATCCTTCTCTTCTTTCTACCTTGTTCATTTTCCTTTGTTCCTATAGACAACTACTTAATTAACTGTGGATCACACAGCAATGCTTCTCTTTTCAATAGACTCTTCATGAGTGATTCAACTAATCCAGGCTCAAATTTTCTCTCTTCTGATGATTCCATTTCTCTCACAAACAAAAACCCATCTCCAAATTTACAAACTTTGTATCACACAGCAAGAGTTTTCATTACCACTGGGAGATACAGGTTCAACATGAAGAAAAATGGTACCCATTTGATTCGTTTTCATTTCTTTCCATTTAAAGATCAAAGTTTTGACTTGAAATCTGCAAAATTTAGTGTCTTGGTTAATGGAATTTCAATTCTAAGTCAATTTAAGCCTCCTGATGATGTGATGGTTAAAGAGTTTATTTTGAAGATTGAATCAAATTTGCTTCAAGTTTTGTTTAGACCCTTTAAATCAGGTTTTGGATATGTAAATGCTGTGGAAGTGTTTACTGCTCCTGAAGATTTTGTTATAGATTATGGAACAAGGTTGGTTGGTCCTTCTGGTGTGGAAGAGTATAGAAATCTTTCATCTCAGGTTTTGGAAACTGTTCATAGGATTAATGTAGGAGGTATGAAAATAACTCCTTTTAATGACACCCTTTGGAGAACTTGGATTCCTGATGAGGATTATTTGGTTTTTAAGGAAGCAGCTAAACATGCAGTAAGCACTCATACACCTGATTACCAGAAGGGAGGTGCTACTCCAGAGATCGCGCCTGAAAATGTTTACATGACTGCTCAACAGATGAATAGGGAAAACTCAAGTTTAGCTTCAAGGTTTAATATAACATGGAATTTTCCTGTGGCTCGTGATGGCGTTTCACATTTGATTCGGTTGCATTTTTGTGATATTGTTAGTACTTCGCTCAACTTGCTTTACTTTGATGTGTATATCAATGGTTACATTGCATATAAGGATCTTGATTTGTCAGCACTAACATTCCACACTCTTGCATCACCGGTCTATGTGGATTTTGTTGCTAATTCAGACGATTCAAGTGTTATTCAAATAAGTGTTGGTCCTTCTGACCTGAGTAGTTCTATTAGGATTAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAACGATGTTGATAATACTAATATTTTCCACAGGAGGAAGCATTTATGGGAGTTGATAGGTTCAATTGCTGGAGGAATTGTCATCGCATTTTTTGTTGTGACTATTTTTCTACTTGCTACCAGATGCAGGAAGAGAAAATCAAAAGAAAGTACAGTGGAAAGTGTTGGATGGACGCCTTTGCGAATGTTTGGAGGGAGTTCCCTTAGTAGAACATCCGAACATGGTTCATATGGATATCTTGGAATGAAGATTCCTTTTGCTGAAATACAATCAGCAACAAACAATTTTGATAGAAATTTGATTATAGGCTCTGGTGGATTTGGTATGGTCTACAAAGGAGTACTCAGAGACAATGTAAAAGTTGCTGTCAAGAGAGGTATGCCAGGTTCAAGACAAGGCCTTCCAGAATTCCACACTGAAATAACAATTTTATCAAAAATTCGCCATCGACATCTTGTTTCACTGGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTTGTTTATGAGTATGTAGAAAAGGGTCCATTGAAAAAGCATTTATATGGTTCGTCACGGCAATCCCCTCTCTCTTGGAAGCAGCGGCTTGAGATATGCATTGGTTCAGCTAGAGGTCTGCACTATCTTCACACCGGTTTTGCTCAAGGAATCATCCACCGCGACATTAAATCGACAAACATATTGATCGATGAAGATAATGTAGCCAAGGTTGCTGATTTCGGTCTATCGAGATCAGGGCCGAGCCTCGATGAAACACATGTGAGTACCGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGAAGGCAACAGCTTACGGATAAATCAGATGTGTATTCATTTGGTGTTGTGCTTTTTGAAGTTCTTTGTGGCAGACCTGCTGTTGATCCACAACTGACTAGGGAACAGGTGAATTTAGCTGAATGGGCGATTGAATGGCTGCAGAAGGGAATGCTGGATCATATTGTTGATCCTCATCTTGTTGGAGATATTAAACCAAGGTCATTGAAGAAATTTGGTGAGACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGATAGACCAACTATGGGTGATGTCTTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGATCGCAGTGCTAGTGAAGCAGTTAATGAAACAACAACGATTGTTCCTGAAAATTCTACCAGTAGAATAGAGAGAAATTATGATAATGATTATTCAGACATAAGTACTAGCCGAGTGTTTTCACAGCTAATGAATAATGATGGCAGATGA 2499 0.3802 MSHMSFPHKLQQLKRPNPSFMETQNLILFILLFFLPCSFSFVPIDNYLINCGSHSNASLFNRLFMSDSTNPGSNFLSSDDSISLTNKNPSPNLQTLYHTARVFITTGRYRFNMKKNGTHLIRFHFFPFKDQSFDLKSAKFSVLVNGISILSQFKPPDDVMVKEFILKIESNLLQVLFRPFKSGFGYVNAVEVFTAPEDFVIDYGTRLVGPSGVEEYRNLSSQVLETVHRINVGGMKITPFNDTLWRTWIPDEDYLVFKEAAKHAVSTHTPDYQKGGATPEIAPENVYMTAQQMNRENSSLASRFNITWNFPVARDGVSHLIRLHFCDIVSTSLNLLYFDVYINGYIAYKDLDLSALTFHTLASPVYVDFVANSDDSSVIQISVGPSDLSSSIRINAILNGAEIMKMVNDVDNTNIFHRRKHLWELIGSIAGGIVIAFFVVTIFLLATRCRKRKSKESTVESVGWTPLRMFGGSSLSRTSEHGSYGYLGMKIPFAEIQSATNNFDRNLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHTEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQSPLSWKQRLEICIGSARGLHYLHTGFAQGIIHRDIKSTNILIDEDNVAKVADFGLSRSGPSLDETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWAIEWLQKGMLDHIVDPHLVGDIKPRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESDRSASEAVNETTTIVPENSTSRIERNYDNDYSDISTSRVFSQLMNNDGR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3713 832 Pfam Malectin-like domain 49 406 IPR024788 -
Mtr1g3713 832 Gene3D - 223 408 - -
Mtr1g3713 832 Gene3D - 46 196 - -
Mtr1g3713 832 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3713 832 CDD STKc_IRAK 509 775 - -
Mtr1g3713 832 Gene3D Phosphorylase Kinase; domain 1 474 578 - -
Mtr1g3713 832 SUPERFAMILY Protein kinase-like (PK-like) 479 775 IPR011009 -
Mtr1g3713 832 Gene3D Transferase(Phosphotransferase) domain 1 579 801 - -
Mtr1g3713 832 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 34 802 - -
Mtr1g3713 832 Pfam Protein tyrosine and serine/threonine kinase 508 703 IPR001245 GO:0004672|GO:0006468
Mtr1g3713 832 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Mtr1g3713 832 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3713 832 PANTHER OS07G0166700 PROTEIN 34 802 IPR045272 GO:0004714|GO:0006468
Mtr1g3713 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3713 Mtr-Chr1 48737054 48740295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3713 22 832 Receptor kinase-like Gene Family AT3G46290 47.698 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr1g3713 Malectin_like 2e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3713 - - gmx:100801169 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3713 1 48737054 48740295 Mtr1g3713 1 48737054 48740295 ECH
Mtr6g1246 6 17943433 17946328 Mtr1g3713 1 48737054 48740295 PCT