Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3710 ATGGCGGCAGAACTTTACACCGCCACAACCTTAAAGCCCTACAATCTCCTCCAACCCTCAACTTCTTCCCCTTCCCCTTCCCCTAAAACACTGTTCTTCACCCCTTTAAGAAGTTTCCCTCATAGCAAAATCCTTGAAACCCAAAGAACAAGAAAATCAACATGCTTCACCGTTTGTGTTCTAACGGAAGATCCAAAACATACATCCCAGTTGAAAACTGAGGAAGAAATAGTTGCACAAAAATTGGCTAGAAAGAAGTCTCAAAGATTCACTTACCTAGTTGCAGCTGTAATGTCTAGCTTTGGTGTCACTTCTATGGCAATCTTAGCTGTTTATTATAGATTCTCATGGCAAATGGAGGGTAGTGGAGAGGTTCCTTGGTCTGAAATGTTTGGCACATTTGCTCTCTCAGTCGGTGCTGCTGTAGGTATGGAATTTTGGGCTAGATGGGCTCATGAGATTCTATGGCATGCTTCCCTGTGGCACATGCATCAGTCACATCATCGACCAAGAGAAGGAGCATTTGAGCTTAATGATGTTTTTGCAATAATCAACGCTGTTCCTGCAATTGCTCTTCTCTCATATGGTTTTTTTAACAAGGGATTGCTGCCTGGTCTCTGTTTTGGTGCAGGTCTTGGAATTACGGTGTTTGGGATTGCCTACATGTTTGTCCATGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCTATTGCCAACGTGCCCTACTTCACAAGAGTTGCTGCTGCTCACCAACTCCACCATTCGGACAAATTTAAAGGGGTGCCATATGGACTCTTTTTAGGACCAAAGGAAGTTGAAGAAGTGGGAGGGATAGAAGAGCTAGAGAAAGAGATAAGTAGGAGAACAAGATCATATACTGGCTCATGA 891 0.4355 MAAELYTATTLKPYNLLQPSTSSPSPSPKTLFFTPLRSFPHSKILETQRTRKSTCFTVCVLTEDPKHTSQLKTEEEIVAQKLARKKSQRFTYLVAAVMSSFGVTSMAILAVYYRFSWQMEGSGEVPWSEMFGTFALSVGAAVGMEFWARWAHEILWHASLWHMHQSHHRPREGAFELNDVFAIINAVPAIALLSYGFFNKGLLPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFTRVAAAHQLHHSDKFKGVPYGLFLGPKEVEEVGGIEELEKEISRRTRSYTGS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3710 296 Pfam Fatty acid hydroxylase 140 267 IPR006694 GO:0005506|GO:0008610|GO:0016491
Mtr1g3710 296 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 293 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3710 Mtr-Chr1 48726518 48728605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3710 1 210 Chloroplast and Mitochondria Gene Families AT4G25700 58.150 5.05e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3710 K15746 - gmx:100802778 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3710 1 48726518 48728605 Mtr6g1255 6 18096451 18101359 ECH
Mtr1g3710 1 48726518 48728605 Mtr1g3710 1 48726518 48728605 ECH
Mtr6g1255 6 18096451 18101359 Mtr1g3710 1 48726518 48728605 PCT