Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3697 ATGCACTCAACCATCCTTCTTGCTTCATCCTCTTCATTTTGTCTCTTTAAATTTTGTACTATCCTCCAAAAGTCAGCGCCACCTTTTCTCCTTGATCTATTTTTCTCACTTTCTCTAAGATTTTTTTGCTCCTTATTAGTATGTTGCTTCAATAGGCAAAAAAAAAACCACACCCCCCAAAAAATAGTTGTGATATTCATTATATCTCACTCATTTGCATTTATAACAATGGCTGAGGATTGGGATTTGTTTGCCATTGTTCGAAGCTGCCAATCAGCCACCAATACAAACACAACAGAAAATTCATTTACCACAACAAATACTATACCATCTTCCATTTCCACTTCTAATTTCAAAGTAGAATTAGAATATGATGCATTTTCTTTTCCCAATGTAGTGCAACCTATAACCAATGAGCTTCAAGGTCTAAACCAATTATTGACATCTTTTACCCCCACCATCACCACTACTACTAGTGGTCATGGTATCAATCCCAATTCCCCTCCTCATATTGCAAGATACATTGGACAACAACAAAACCATTTTGTCCCTACTACTTCATCTTCCATTTGGCCTCCTCATTTTGTGCAAGAAACTTCCACTTCTAGCTTCAACAAATTCCATAACCAACAATTACAACAGCAACATAATCAACTACAAGCAATTCAGAAACAAGAATTTCAAGTACCCCAAAGCATCCAGTCTCAAACACCTAGATCAAGAAAAAGAAAAAGTCAACAAGGGAAAATGGTGTGCCATGTAACCGCAGATAACCTCTCAACAGATTTGTGGGCATGGCGAAAATATGGACAAAAACCCATTAAAGGTTCTCCATATCCAAGGAACTACTACAGATGTAGCAGTTCCAAAGGTTGTACCGCGCGAAAGCAAGTTGAAAGGAGCAACACTGAAGCAGACATGTTCACTGTGACATACACAGGAGATCATAACCATGCAAGACCTACCCATCGGAACTCACTAGCCGGTAGTACACGAACCAAGTCTCCGGTGACACATCCAACCACTTCAATTTCTGGTCAACCCAACAGCTCAATTTCTTCTTGCTCTTCTTTAGCACCAAACTCTTTTGCTGAAGAAGAAGAAGACATCGACATGGAAATTGAAACTGATGATGATGGTGAAGATAGTTGTGATATTCCTTCCTAA 1167 0.389 MHSTILLASSSSFCLFKFCTILQKSAPPFLLDLFFSLSLRFFCSLLVCCFNRQKKNHTPQKIVVIFIISHSFAFITMAEDWDLFAIVRSCQSATNTNTTENSFTTTNTIPSSISTSNFKVELEYDAFSFPNVVQPITNELQGLNQLLTSFTPTITTTTSGHGINPNSPPHIARYIGQQQNHFVPTTSSSIWPPHFVQETSTSSFNKFHNQQLQQQHNQLQAIQKQEFQVPQSIQSQTPRSRKRKSQQGKMVCHVTADNLSTDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCTARKQVERSNTEADMFTVTYTGDHNHARPTHRNSLAGSTRTKSPVTHPTTSISGQPNSSISSCSSLAPNSFAEEEEDIDMEIETDDDGEDSCDIPS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3697 388 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 79 379 - -
Mtr1g3697 388 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 79 379 IPR044810 GO:0003700
Mtr1g3697 388 Pfam WRKY DNA -binding domain 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g3697 388 MobiDBLite consensus disorder prediction 323 361 - -
Mtr1g3697 388 SUPERFAMILY WRKY DNA-binding domain 255 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr1g3697 388 MobiDBLite consensus disorder prediction 364 388 - -
Mtr1g3697 388 Gene3D WRKY domain 244 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr1g3697 388 Coils Coil 205 225 - -
Mtr1g3697 388 MobiDBLite consensus disorder prediction 314 388 - -
Mtr1g3697 388 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g3697 388 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr1g3697 388 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3697 Mtr-Chr1 48635377 48637356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3697 239 343 WRKY Transcription Factor Family AT5G52830 76.147 1.10e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr1g3697 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3697 K13425 - cam:101509183 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0892 8 10975353 10977698 Mtr1g3697 1 48635377 48637356 ECH
Mtr7g2052 7 36762157 36763974 Mtr1g3697 1 48635377 48637356 ECH
Mtr8g3504 8 45590205 45591690 Mtr1g3697 1 48635377 48637356 ECH
Mtr1g3697 1 48635377 48637356 Mtr1g3697 1 48635377 48637356 ECH