Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3694 ATGGAAAACCAACCATCACCACTTCCACCAAAAACATACAAACTAACAGCAACTTCAATCTCTTACTCCAAAAACCTACAAACAAACAACACCATCATTGCACCATTTCTCTTCTTCAAACATTGTACACCAACCCCCCCAAACTACATCCTCAAAGATGTTTCCCTCACAGCATACCCTTCTGAGATTCTTGCCATTGTTGGTCCAAGTGGTGCAGGAAAATCAACTCTTCTAGACATTCTTTCAGCTAGAAGATTACCCTTAAGTGGTACACTTTCTCTTAACTCTTCACCTATCACTAACCCTTCTACATTCAGAAAACTCTCTGCTTATGTTCCTCAACATGATGCATGTCTTCCTATGTTAACTGTTTCTGAAACTTTTGCTTTTTCTGCTTCTCTTCTTAAGCCTAAAACCATTGATATTGCTGCTATTGTTTCTTCTCTTTTAAACGAGCTTAGACTCACTCATTTGGCTAATACAAGGCTTAATCATGGTTTATCTGGTGGTGAACGTAGAAGGGTCTCTATTGGACTTAGTCTTCTTCATGATCCTGCTGTTTTGCTACTTGATGAACCTACTTCTGGTCTTGATAGTTCCTCTGCTTTCAAAGTCATGCAAACTCTTAAATCAACTTGTGTTTCATATAACAGAACTATTGTTCTTTCCATTCACCAACCAAGTTTCAAGATTCTCTCTTGTATTGATAGAATCTTACTTCTTTCAAAAGGAACTGTTGTTCATCATGGAAGCTTAGCTTCACTTCAATCATTCTTGCTTTCAAAAGGGTTCACTGTTCCACATCAGCTTAATGCATTGGAATATGCAATGGAAATATTAAACCAATTGAATGAGATTGAACCAATGATTACACCCCCAAGTTTACCTGAGTCACCAGAGAATTCTGAATCTTCAATAGCTTGTACTTCTGCATCTGACAATATTGGAAGAACTAAAGGTAAAAGCAGAGAGATCAGATACAAGAGTTCAAGGATTCATGAAATTTGTACACTTTTTAGAAGATTTTGGAAGATCATATACCGAACAAAACAACTACTGTTGACAAACACAGCAGAAGCATTACTTGTTGGTCTTGTTTTAGGAACAATTTACATAAACATTGGGTTTGATAAAGAAGGGATTGAGAAAAGGTTTGGTCTTTTTGCATTCACTCTAACATTCCTCTTATCTTCCACAACTGAAACACTTCCAATCTTTATCAATGAGAGACCAATCTTGTTAAGAGAAACATCAAGTGGTGTTTATAGGCTATCATCTTATCTTATAGCAAATACACTTGTTTTCTTGCCATATTTGCTAGTAGTTGCTGTTATCTACTCTATTCCAGTTTACTTTTTAGTGGGTCTTTGTAGTTCTTGGCTATCTTTTGCTTACTTTGTTTTGGTTATTTGGGTCATAGTTCTTATGGCAAACTCATTTGTTCTGTTCTTGAGTTCTTTAGCACCAAACTACATTGCTGGAACTTCACTCATGACAGTGCTACTTGCAGCATTTTTTCTGTTCTCTGGATACTTTATATCTAAGGATTGTTTACCTAAGTATTGGCTCTTCATGCACTTCTTTTCTATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTATTCTTGCTTAGCTACAAGGTGCATGATATGGTTTCAAGAGAATGATCAAGAATGCATGATCACTGGTGGTGACGTGTTGCAGAAGAGAGGGCTCCATGAGGGACAGAGATGGACCAATGTGTACTTTTTGATTGGGTTCTTTGTTTTTTACCGTGTGCTTTGTTTCTTGGTTTTACTTAGAAGGGTTTCAAGATCCAAAACTTGA 1833 0.3677 MENQPSPLPPKTYKLTATSISYSKNLQTNNTIIAPFLFFKHCTPTPPNYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARRLPLSGTLSLNSSPITNPSTFRKLSAYVPQHDACLPMLTVSETFAFSASLLKPKTIDIAAIVSSLLNELRLTHLANTRLNHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSAFKVMQTLKSTCVSYNRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQSFLLSKGFTVPHQLNALEYAMEILNQLNEIEPMITPPSLPESPENSESSIACTSASDNIGRTKGKSREIRYKSSRIHEICTLFRRFWKIIYRTKQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAVIYSIPVYFLVGLCSSWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLMTVLLAAFFLFSGYFISKDCLPKYWLFMHFFSMYKYALDALLINEYSCLATRCMIWFQENDQECMITGGDVLQKRGLHEGQRWTNVYFLIGFFVFYRVLCFLVLLRRVSRSKT* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3694 610 Pfam ABC transporter 51 195 IPR003439 GO:0005524
Mtr1g3694 610 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 605 - -
Mtr1g3694 610 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 605 - -
Mtr1g3694 610 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524
Mtr1g3694 610 Gene3D - 39 285 IPR027417 -
Mtr1g3694 610 Pfam ABC-2 type transporter 225 285 IPR043926 GO:0140359
Mtr1g3694 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 256 IPR027417 -
Mtr1g3694 610 SMART AAA_5 60 245 IPR003593 -
Mtr1g3694 610 Pfam ABC-2 type transporter 334 543 IPR013525 GO:0016020|GO:0140359
Mtr1g3694 610 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 268 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3694 Mtr-Chr1 48618443 48620639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3694 44 263 Calmodulin-binding Proteins AT2G36910 28.194 7.98e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3694 K05681 - gmx:100790712 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3694 1 48618443 48620639 Mtr1g3694 1 48618443 48620639 ECH