Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3689 ATGATGGAACAAAAGCATGTTTTGTTGTTAGCAGCATTAGGTGTTGGGATTGGATTAGGTGTAGGAGTAGGAACATGGGTTGGTGAGAAAGATGTTTTGTTATCAGTATTTAGTGTTGTGATTGGGTTGATTGTAGGACTTGGAATATGGTTTGGTTTTGGAGGTGATTCTGATGAGTCTAATCATATTTCTGAGAATCAAATTGTGAAGGGACTCAAGAAACTAGTCATTGATGGAAAGGATAGTAAAGTTACATTTGATGACTTTCCTTATTACTTGAGTGAAAAAAACAAAATTTTGTTGACAAGTGCTGGATATTTTCATTTAAGACAACATGACTTATCCAAGCACACCAGGAACCTTTCGCCAGTAAGACGGGCTATTTTGCTTTCTGGACATGCAGAACATTATCATCATAAGCTTGCCGGAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTCTCTAGATATTGCTCACTTTTCTTTGAAGATGCAGGGAAAATACGGATGTCCTAGAAAAGAACCATATTTTAAAAGGTCCATCTTTGAGGCGACTCGGGAGTTTGTGTCTGGTTTATTTGTTTCCCTGTCAATCCTCCCTTCAAAAGGCGCGATTAGAGCTCCTTCAAACTCCACAAGCTGCTACTTTTTTGATGAAAAGCTTTTCCTACATTCACTCTACAAGGTCTTGGTTTCTATATCAGAAGCTGGTTCTGTTATTTTATACATCAAGAATGTTGAGAAGGTCTTTCTTGGATCACCAAGGATGTACAGATTGTTCCAAAAGACATTAAATAAACTTTCAGGATCAGTGTTGATACTCGGTTCCCGGCCTTATGATTTAAAATATAACTGTACCAAAGTCAATGAAAAACTCACTATGTTATTCCCTTACAACATAGAGATCACACCACCTCAAGATGAGACTCATCTCAAAATCTGGAAAAGCCAACTAAAAAAGGCCATGAAAAAGACTCACTTGAAAGACTACACCACCCACATTGCTGAAGTGCTTGCAGCAAATGACCTTTATTGTGATGACTTGGATACAGTTGACCATAACGACATGACAATACTCAGTAATCAGACCGAAGAGGTTGTGGCATCTGCAATTTTTCATCACTTGAAGGATGCCAAAAATCCAAAGTATCGAAATGGAATCCTAATTATATCGGCCAAGAGTTTGCGCCATGTACTGAGTCTGTTCCAGGAGGGTGAAAGTAGCGAGAAGGATAACAAGAAGACTAAAAAAGAATCAAAAAGGGATGATAGCAGGAAAGAAAAACCAAAAGAGTCAAAGAAAGACGGAGATATTAAAGCTTCTGCAAAATCAGATAGTCCTGACAATGCCTTTGAGGAATGCATAAGACAAGAGCTTATCCCTGCAAACGAGATAAAGGTGACTTTTTCAGATATTGGTGCTTTGGATGATGTTAAAGAATCACTTCAAGAAGCGGTTATGCTTCCCCTTAGAAGACCAGATCTATTCAAAGGTGATGGGGTTCTGAAGCCATGTAAAGGTGTATTGCTTTTTGGACCTCCTGGTACAGGAAAGACAATGCTTGCCAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCTCCATCCACCATCACTTCGATGTGGCAAGGACAATCTGAAAAGAACGTCCGAGCTCTATTTTCGCTTGCGGCGAAGGTTGCTCCAACTATTATTTTCATTGACGAAGTTGATAGCATGCTTGGGCAACGGTCTAGCACTCGTGAGCACAGCTCAATGAGAAGGGTCAAAAATGAATTCATGTCCCGTTGGGATGGACTATTGTCAAAACCTGATGAGAAAATTACTGTTCTTGCTGCAACCAACATGCCATTTGACCTTGATGAAGCAATTATCAGACGGTTTCAGCGCAGGATCATGGTTGGTCTTCCGTCTGCTGATAACAGGGAAACAATCTTGAAAACTATTCTAGCTAAGGAAAAATCTGAAAATATGAACTTCGAAGAGCTTTCAACTATGACAGAAGGATATAGCGGAAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATCGCCCCCTTAAGGAGCTAATACAACAGGAGAAGGAAAAAGAAATGACAAAGAAGAAAAAGGTGACAGAAGTTGAAATCTTAGAAGAAGCTTCCATTGCTACCGAAGAAGATAAAGAAGATCAAGTGATTGCCCTCAGGCCTTTAAACATGGAGGACATGAGAGAGGCAAAGAATAAGGTGACTGCAAGTTTTGCTGCAGAAGGATCAATAATGACCAGGTTGAAGGAATGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGGAGCAGCTCAGTTATTTCTTTTAG 2358 0.3982 MMEQKHVLLLAALGVGIGLGVGVGTWVGEKDVLLSVFSVVIGLIVGLGIWFGFGGDSDESNHISENQIVKGLKKLVIDGKDSKVTFDDFPYYLSEKNKILLTSAGYFHLRQHDLSKHTRNLSPVRRAILLSGHAEHYHHKLAGALAHCFESKLLSLDIAHFSLKMQGKYGCPRKEPYFKRSIFEATREFVSGLFVSLSILPSKGAIRAPSNSTSCYFFDEKLFLHSLYKVLVSISEAGSVILYIKNVEKVFLGSPRMYRLFQKTLNKLSGSVLILGSRPYDLKYNCTKVNEKLTMLFPYNIEITPPQDETHLKIWKSQLKKAMKKTHLKDYTTHIAEVLAANDLYCDDLDTVDHNDMTILSNQTEEVVASAIFHHLKDAKNPKYRNGILIISAKSLRHVLSLFQEGESSEKDNKKTKKESKRDDSRKEKPKESKKDGDIKASAKSDSPDNAFEECIRQELIPANEIKVTFSDIGALDDVKESLQEAVMLPLRRPDLFKGDGVLKPCKGVLLFGPPGTGKTMLAKAIANEAGASFINVSPSTITSMWQGQSEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRSSTREHSSMRRVKNEFMSRWDGLLSKPDEKITVLAATNMPFDLDEAIIRRFQRRIMVGLPSADNRETILKTILAKEKSENMNFEELSTMTEGYSGSDLKNLCMTAAYRPLKELIQQEKEKEMTKKKKVTEVEILEEASIATEEDKEDQVIALRPLNMEDMREAKNKVTASFAAEGSIMTRLKEWNDLYGEGGSRKKEEQLSYFF* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3689 785 Gene3D - 641 714 - -
Mtr1g3689 785 Pfam AAA+ lid domain 663 703 IPR041569 -
Mtr1g3689 785 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 209 784 - -
Mtr1g3689 785 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 29 207 - -
Mtr1g3689 785 CDD AAA 507 640 - -
Mtr1g3689 785 Pfam ATPase family associated with various cellular activities (AAA) 509 639 IPR003959 GO:0005524|GO:0016887
Mtr1g3689 785 MobiDBLite consensus disorder prediction 405 443 - -
Mtr1g3689 785 ProSitePatterns AAA-protein family signature. 612 631 IPR003960 GO:0005524|GO:0016887
Mtr1g3689 785 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 209 784 - -
Mtr1g3689 785 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 29 207 - -
Mtr1g3689 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 717 IPR027417 -
Mtr1g3689 785 MobiDBLite consensus disorder prediction 405 449 - -
Mtr1g3689 785 SMART AAA_5 505 642 IPR003593 -
Mtr1g3689 785 Gene3D - 467 640 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3689 Mtr-Chr1 48575948 48582559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3689 467 747 Calmodulin-binding Proteins AT3G56690 36.842 4.35e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3689 - - cam:101506297 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3689 1 48575948 48582559 Mtr1g3689 1 48575948 48582559 ECH
Mtr6g0902 6 11634582 11640727 Mtr1g3689 1 48575948 48582559 PCT