Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3684 ATGGCTTCTTTATTTACGTGTTATTGTGTTGTTACTTTGTTATTGGTTTGTTTATGTAGTTGCATTTCAAGTCAGATTGGGTTGGGGTCTAGATTATTGGCTAGTAAGGACCAAGTTTGGGTTTCTGATAATGGTACATTTGCTATGGGGTTTACTCCATCAAAAACTGATAATCATTTGTTCACGTTGGGCATTTGGTTTGCTAGGCTACCAGGAGATAGAACTTTTGTTTGGTCACCCAATAGAAACTCTCCTATATCTCATGAAGCAATTTTGGAGCTTGACACAACAGGAAACCTCATTCTCATGGACAAAAAAATCACCATATGGGCCACAAACACTTCAAATGCTAATGTAGAATCAGCAACCATGTCAGAATCAGGCAACTTCATCCTTCACAACATAAATAACCACCCTATATGGCAGAGTTTTTCTCAACCTTCAAACACACTCCTCCCAAACCAGCCTCTAACAGTTTCTTCAGAATTAACATCACCAAAATCTTCATCTCATGGTGGCTATTATGCTCTCAAAATGCTTCAACAACCAACTTCTTTAAGCCTTGCACTGACTTACAATCTTCCAGAAACTTACCAAACTTTGGATGAAAATGAATCATCATATGCCAACTATTCTTATTGGCAAGGTCCTGAGATTTCCAATGCAACCGGCGAAGTTATTGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGTGCAGTTTATGTGTATAAGAATGATAATGATGATGCAGGTTTGGCTTCTGCAATTCATCAGTCTACGCCGTTAACAGTTCTTCGGAGACTAACACTCGAAGAGAACGGAAATTTACGGTTGTATCGTTGGGAAGACGTAAATGGATCGAAACAATGGGTGACACAATGGGCTGCAGTTTCAAATCCATGTGATATTGGTGGAATTTGTGGCAATGGAGTTTGTAAATTGGATAGAACTAAGACAAATGCATCTTGCACTTGTTTGCCAGGAACTTCTAAAGCTGGTAGAGATGGACAATGTTATGAGAATTCATCTCTTGTTGGAAAATGTACTAATGGCCAAAATGAAAACATGACATCAAAGTTTAGAATTTCAATGGTGCAGCAAACTAATTATTATTTTTCTGAATCATCAATAATAGCTAATTTTAGTGAGAGTGATGTTTCTTCTTTATCAAAATGTGGTGATGCATGTTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGACTCAATGAGGAGAGACCATTTTGTTGGGTGTTGAGGAGTTTAAATTTCGGTGGTTTTGAAGATACAAGTTCTACTTTGTTTGTGAAGGTTAGAGCCAATAGTTCATGGACACCGGAAGGACAAGATGGAAGTTCTAATAGTTCTTCTGATGGAATGGGGAGTGCTAAGGAGAAGGCTGTGATTATTCCAATTGTTTTAGGAATGATAGTTCTCATTTTTTTGCTATGTATGTTACTGTATTACAGTGTTCATAGAAAAAGAACTTTGAAAAGAGAGATGGAAAGTTCATTGGTCTTATCAGGTGCTCCAATGAATTTTACATACCGCGCTTTGCAAATCAGGACGAGTAACTTTTCGCAGCTTCTAGGAACAGGTGGATTTGGAAGTGTGTATAAAGGAAGCCTCGGAGATGGTACTCTAATTGCAGTGAAGAAACTTGACAAGATATTGCCTCATGGAGAGAAAGAGTTTATAACTGAAGTAAACACAATTGGCTCAATGCATCATATGAATTTGGTTCGTCTATGCGGTTTTTGTTCTGAGGGACCACACAGGCTTCTAGTGTACGAGTTCATGAAGAATGGTTCATTGGATAAATGGATCTTCCCTTCATATCGAGGGCGAGATAGATTGCTAGATTGGCAAACTCGTTTCGATATAGCCATAAATACTGCACAGGGGATTGCATACTTTCATGAGCAATGCAGAAATAGGATAATACATTGTGATATCAAACCAGAAAATATATTGTTAGATGAAAACTTTTGTCCTAAAGTATCTGATTTTGGACTGGCCAAATTGATGGCAAGGGAACACTCTCAAGTAGTAACAATGGTTAGAGGTACTAGAGGTTATTTGGCGCCTGAATGGGTTAGTAATCGACCTATAACTGTAAAAGCAGATGTTTACAGCTATGGTATGCTTCTTTTAGAAATCATTGGTGGTAGGAGAAATCTTGACTTGTCCTTTGATGCAGAAGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGGCAAATGGATCAGCAATAAAAGTGGCAGATAGAAGCTTAAATGGAGCAGTTGATGAAGAAGAGCTAACGAGAGCTTTGAAAATTGGCTTTTGGTGCATACAAGATGATGTTTCCATGAGACCAACAATGGGAGAAGTGGTGAGATTGCTTGAAGGTCAAGGTTCAAATAACATAAATATGCCACCAATGCCACAGACAGTACTAGAGTTAATTGAGGAAGGGTTGGACCATGTCTACAAAGCTATGAAAAGAGAGTATAACCACTATAGTTCATTCACCATTACAAGCCATCTTACATCTCATGCAACATGTAGCAATTCCACAATGTCACCAAGATAG 2601 0.3833 MASLFTCYCVVTLLLVCLCSCISSQIGLGSRLLASKDQVWVSDNGTFAMGFTPSKTDNHLFTLGIWFARLPGDRTFVWSPNRNSPISHEAILELDTTGNLILMDKKITIWATNTSNANVESATMSESGNFILHNINNHPIWQSFSQPSNTLLPNQPLTVSSELTSPKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQTLDENESSYANYSYWQGPEISNATGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPLTVLRRLTLEENGNLRLYRWEDVNGSKQWVTQWAAVSNPCDIGGICGNGVCKLDRTKTNASCTCLPGTSKAGRDGQCYENSSLVGKCTNGQNENMTSKFRISMVQQTNYYFSESSIIANFSESDVSSLSKCGDACLSDCDCVASVYGLNEERPFCWVLRSLNFGGFEDTSSTLFVKVRANSSWTPEGQDGSSNSSSDGMGSAKEKAVIIPIVLGMIVLIFLLCMLLYYSVHRKRTLKREMESSLVLSGAPMNFTYRALQIRTSNFSQLLGTGGFGSVYKGSLGDGTLIAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEFMKNGSLDKWIFPSYRGRDRLLDWQTRFDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMANGSAIKVADRSLNGAVDEEELTRALKIGFWCIQDDVSMRPTMGEVVRLLEGQGSNNINMPPMPQTVLELIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3684 866 Pfam D-mannose binding lectin 75 161 IPR001480 -
Mtr1g3684 866 PANTHER OS07G0415500 PROTEIN 6 866 - -
Mtr1g3684 866 SMART serkin_6 532 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3684 866 Gene3D Phosphorylase Kinase; domain 1 496 607 - -
Mtr1g3684 866 PIRSF SRK 1 856 IPR024171 GO:0004674
Mtr1g3684 866 SUPERFAMILY Protein kinase-like (PK-like) 510 805 IPR011009 -
Mtr1g3684 866 CDD STKc_IRAK 538 806 - -
Mtr1g3684 866 Gene3D Transferase(Phosphotransferase) domain 1 608 816 - -
Mtr1g3684 866 Pfam Protein kinase domain 535 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3684 866 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Mtr1g3684 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Mtr1g3684 866 Pfam S-locus glycoprotein domain 256 336 IPR000858 GO:0048544
Mtr1g3684 866 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 6 866 - -
Mtr1g3684 866 SMART blect_4 31 147 IPR001480 -
Mtr1g3684 866 Gene3D - 23 146 IPR036426 -
Mtr1g3684 866 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 149 IPR036426 -
Mtr1g3684 866 CDD B_lectin 35 147 IPR001480 -
Mtr1g3684 866 ProSiteProfiles Protein kinase domain profile. 532 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3684 866 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3684 Mtr-Chr1 48522570 48526858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3684 503 816 Receptor kinase-like Gene Family AT5G20050 43.293 1.48e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr1g3684 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3684 - - gmx:100794281 1482.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3684 1 48522570 48526858 Mtr1g3684 1 48522570 48526858 ECH