Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3673 ATGCTCAGTCACACTTTCATCATCTTCCATTTCTTTCTCTTCACCATTTTCATTCTCCCTTCACTTTCTCTTCCTTCACAAAACATCACACTCTTTGGTGATGCTTCCTACACAGACACTTCCATTACTCTCACAAAACAACAACACACTTGTCTTTCTTCTTCTTCTTCTTCTTCTTCTGGAATTGGAAGAGCTTTCTACCTCTATCCTGTTCGTTTTCTTGATCCTTTAACTAACTCAACCGCTTCTTTTTCATGTCGTTTCTCTTTCTCAATCCTTTCTTCACCTTCTTGTCCTTCTTCTTCCGATGGCATTGCTTTTCTCATTTCATCAACCACTGATTTCTCGTCTCTCTCTAATGGTTACATGGGCCTTCCTCATTCTGATCAAGATTCTTACTTTGCGGTTGAATTTGATACGAGTTTTGATCCTTCTCTTGGTGACATTAATGGAAACCACGTTGGTATTGATCTTGGCAGTGTTGTTTCTTTTGCTTCTGCTGATCTTCTTTCACGTCGGATTGATTTGAAAAGTGGGAAAATCATCAATGCATGGATTGAGTATAGAGATGATATGAAAATGGTTCGTGTTTGGGTTAGTTACTCTTCAACTAGACCTCCAACACCAATTATTGCTTCATTCATTGATCTTTCTGAGAGATTTAAAGAGTTTATGCATGTTGGTTTCTCTGCTTCTAATGGAAAAGGTTCAAGTATTCACCTTGTTCATCATTGGCAGTTCAAAACTTTGAGTTATTCTCATTCTGTTGGTCCAATGGATAATGTAGAAGAAGGTGACTGTTTCTTGTGTTATGCTGGTGATTCAAAAGCATCGAAGAAAAAAGGTGAAAATTCTAGGACAAATATTAGTGAGATAGCTCTTGGAATTGGTGGCATAACAGCTTTTGTTGTGGGGTCTGCATTGGCACTAATCGTTGTGATATGTGTTTTGATTAAAAGGAAAAGGGGGGTAATTAGAAAGATTAGGGAAGGTCAGAGTAGTAGGTTTCAGACAAATAAAGTTCCAGTCAAGTTATCACTTTCAGAGATTACATCAGCTACAATGGGATTTAATAGAGATAGACTAGTTGGTGAAGGTGCATCAGCAAAAGTTTATAAAGGGTCACTTCCATTTGGAGGTGATGTAGCTGTCAAGAGATTCGAAAAAATCGATGAATTGGATCGCTTACACAATCCTTTTGCAACCGAGTTCGCTACAATGGTAGGTTGCTTGCGGCACAAGAATCTGGTTCAGCTTAAAGGGTGGTGTTGTGAAGGGAATGAATTGGTTTTGGTTTATGAGTATCTACCAAATGGAAGCCTTGATAAAGTTCTGCATAGGAATTTAAGTTCTTCATTTGTTCTTTCATGGAAACAAAGAGTTAATATAATTCTAGGTGTTGCTGCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGACAAATCATTCATAGAGATGTGAAGACATGTAACATAATGCTTGATGTTGATTTCAATGCAAAGCTTGGTGATTTTGGACTAGCAGAAGTGTATGAACATAGTTCTAGTACAAGGGATGCTACTATACCAGCAGGAACAATGGGATATCTTGCACCCGAATATGTTTATTCGGGTGTTCCAACCGTGAAGACTGATGTATATAGTTTTGGTGTCGTGATAATTGAAGTTGCGACTGGGAGGAAGCCTGTTGCAGACGACGGAACTGTCATTGGTGACTATGTTTGGAGTCTGTGGGAAAAGAATAGACTCGTTGAGGCGGCTGATCCGAAATTGATGGGGGAATTTGATGTAATTGAGATGGAGAGGATGTTATTGGTAGGGCTTGTTTGTGTGCATCCAGATTATGAGAAGAGACCTAGAGTTAGAGATGCAGCTAGAATGATAAAGAAAGAAGCACCACTTCCATTGTTGCCTACAACTAAACCATGGGTGAGGATTATGCCTGTTTGTCCTAATGACACACCTGAAACTCAAGATGTTGTTGGTGATTGGGTTAGTAATGATGAGGCTCCTTATTTGACTCCTAGGAGCCAATTTTACTAG 2043 0.3911 MLSHTFIIFHFFLFTIFILPSLSLPSQNITLFGDASYTDTSITLTKQQHTCLSSSSSSSSGIGRAFYLYPVRFLDPLTNSTASFSCRFSFSILSSPSCPSSSDGIAFLISSTTDFSSLSNGYMGLPHSDQDSYFAVEFDTSFDPSLGDINGNHVGIDLGSVVSFASADLLSRRIDLKSGKIINAWIEYRDDMKMVRVWVSYSSTRPPTPIIASFIDLSERFKEFMHVGFSASNGKGSSIHLVHHWQFKTLSYSHSVGPMDNVEEGDCFLCYAGDSKASKKKGENSRTNISEIALGIGGITAFVVGSALALIVVICVLIKRKRGVIRKIREGQSSRFQTNKVPVKLSLSEITSATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFEKIDELDRLHNPFATEFATMVGCLRHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNLSSSFVLSWKQRVNIILGVAAALTYLHEECERQIIHRDVKTCNIMLDVDFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVIIEVATGRKPVADDGTVIGDYVWSLWEKNRLVEAADPKLMGEFDVIEMERMLLVGLVCVHPDYEKRPRVRDAARMIKKEAPLPLLPTTKPWVRIMPVCPNDTPETQDVVGDWVSNDEAPYLTPRSQFY* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3673 680 Pfam Protein kinase domain 358 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3673 680 PANTHER - 24 646 - -
Mtr1g3673 680 ProSiteProfiles Protein kinase domain profile. 357 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3673 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 250 IPR013320 -
Mtr1g3673 680 Gene3D - 12 260 - -
Mtr1g3673 680 Pfam Legume lectin domain 12 249 IPR001220 GO:0030246
Mtr1g3673 680 Gene3D Transferase(Phosphotransferase) domain 1 436 633 - -
Mtr1g3673 680 Gene3D Phosphorylase Kinase; domain 1 319 435 - -
Mtr1g3673 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Mtr1g3673 680 SMART serkin_6 357 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3673 680 CDD STKc_IRAK 363 630 - -
Mtr1g3673 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 24 646 - -
Mtr1g3673 680 SUPERFAMILY Protein kinase-like (PK-like) 336 627 IPR011009 -
Mtr1g3673 680 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Mtr1g3673 680 CDD lectin_legume_LecRK_Arcelin_ConA 17 249 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3673 Mtr-Chr1 48443296 48445340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3673 4 679 Receptor kinase-like Gene Family AT5G42120 54.208 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g3673 Pkinase 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3673 - - lang:109346768 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3673 1 48443296 48445340 Mtr1g3673 1 48443296 48445340 ECH