Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3668 ATGGATTTACTTGAAGGCGTTGGAGAGAGTTCATCGCCACCTCGTTCCTTCGGCGGCGGTTACACGAACTACGATATCAGAACCGACGTTTATAACCGTTTGGTTGAAACCGGTCACGAACAAGCCGTATCGAATCCGGAGTTTCGTGAACAGCTTGATTCTCACTTCAATCGTTTGCCTCCAAGTTATGGACTTGATGTGAATGTTGATAGAGCTGAAGATGTTTTACTTCATAGGAGTCTTCTTGATTTGGCAAGAGATCCTGATAAGCGTCCCGTTTACCATATTCGTTTATTGGAGAATATTGCTACTAGGACAGATGGTGAGGATCAAGAAATTGTTAATACTCATACTCGCCCCGAGTCTTCTTCTCATGCAACAAATGGGGGAGTCATAGCATCTAATAAGAGGACAAGAGATCTGGCAACCGAGTTTGAGACTTACTCGAAGCTTGAGGATCTAAATTTGGATGTTATGAAGAACTCCAAGGATAAAATTGACAGCTTTTCCCAGAGGCATGAACATTCAAGTGTCCCGGTTCATGAAATAATATTTTCCGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTGTCCGCATTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTATTTTCCACAACTGATGGATACTCCCTTGATGTTTTTGTGGTGGATGGATGGCCACTAGAGGAAACTGATGGTTTGTATGCTGCTATGGAAAAAGCTGTAGCAAGGAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGAGAAAGCCTTAGCAGCAGAAGGAAAATCTGGAGACTGGGAAATAGACAGGAGGTCATTAAAGATAGGAGAAAAAATAGCATCTGGATCCTGTGGAGATTTGCATCATGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTTCTGAAATCTGATCAACTGAATGATGCCTTAGAGGATGAGTTTACTCAAGAAATAGCAATTTTGAGACAGGTAGAACATAAAAATGTTGTCCGTTTCATTGGTGCATGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTCTGTATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTATCTCAATTACTCAAGTTTGCAATTGATGTCTGCAAAGGAATGGAGTATTTGCATGGAAACAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATGCTCACAACGTTGTTAAAGTGGCAGATTTTGGAGTTGCCCGGTTCCTAATTCAGGGGGGAGTGATGACTGCAGAAACTGGAACCTATAGATGGATGGCTCCAGAGGTCATAAACCACCAGCCTTATGATCAAAAGGCAGATGTCTTCAGTTTTGCAATAGTCCTATGGGAACTAGTGACAGCAAAGATACCATACGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGGCTGCGACCAGAACTTCCAAAGAACGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCTAGCAGTCGTCCATCCTTCAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATTATTCAGAAGTTAATGGGGCTTAA 1644 0.4215 MDLLEGVGESSSPPRSFGGGYTNYDIRTDVYNRLVETGHEQAVSNPEFREQLDSHFNRLPPSYGLDVNVDRAEDVLLHRSLLDLARDPDKRPVYHIRLLENIATRTDGEDQEIVNTHTRPESSSHATNGGVIASNKRTRDLATEFETYSKLEDLNLDVMKNSKDKIDSFSQRHEHSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETDGLYAAMEKAVARSEGSWSHSSNSHSAVEKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLHHGVYLGEDVAVKVLKSDQLNDALEDEFTQEIAILRQVEHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGNNIIHRDLKTANLLMDAHNVVKVADFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFAIVLWELVTAKIPYDTMTPLQAALGVRQGLRPELPKNGHPKLLDLMQRCWEAIPSSRPSFNEIRVELENLLLEVENYSEVNGA* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3668 547 Coils Coil 524 544 - -
Mtr1g3668 547 SUPERFAMILY Protein kinase-like (PK-like) 272 536 IPR011009 -
Mtr1g3668 547 ProSiteProfiles Protein kinase domain profile. 283 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3668 547 Pfam Protein tyrosine and serine/threonine kinase 283 530 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 SMART serkin_6 283 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3668 547 PRINTS Tyrosine kinase catalytic domain signature 357 370 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 PRINTS Tyrosine kinase catalytic domain signature 394 412 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 PRINTS Tyrosine kinase catalytic domain signature 440 450 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 PRINTS Tyrosine kinase catalytic domain signature 459 481 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Mtr1g3668 547 MobiDBLite consensus disorder prediction 1 20 - -
Mtr1g3668 547 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 541 - -
Mtr1g3668 547 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 11 541 - -
Mtr1g3668 547 CDD STKc_MAP3K-like 289 527 - -
Mtr1g3668 547 Pfam ACT domain 181 228 IPR002912 -
Mtr1g3668 547 Gene3D Phosphorylase Kinase; domain 1 272 361 - -
Mtr1g3668 547 ProSiteProfiles ACT domain profile. 182 254 IPR002912 -
Mtr1g3668 547 Gene3D Transferase(Phosphotransferase) domain 1 362 545 - -
Mtr1g3668 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Mtr1g3668 547 SUPERFAMILY ACT-like 181 250 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3668 Mtr-Chr1 48337076 48350335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3668 25 538 MAP Kinase Kinase Kinase AT2G17700 51.803 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr1g3668 PK_Tyr_Ser-Thr 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3668 - - mtr:MTR_1g099110 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3668 1 48337076 48350335 Mtr1g3668 1 48337076 48350335 ECH