Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3661 ATGATTATTTGGCTTATAAAAATGAATGAAAAGAGTATTTTATTCGGTACTTCACATATATTTAGTATAAAGGAGTTCTTTGATGGCAAACTTAAAAACACACAGCAAGAAGCCGAGAGCAAAAGACCGACCAACTGCGCCTATTCACAAATATACACGAATAAAGAAGAATCAATGGAGAATCAAGTACAAGAAGACATGAAGATATCTTTCAATATTCCACAAGTTCATGGCTTGGAGCCCTCAAGAGAAAAAGATAAGGATTGTAAAATTCAAGAAGAAAATAATAATGGACATAATATGAACCTTGCCATCACCAATTGCACTGGGGAGTCCCAAGGCAAATTGGCTGAAGTTATTAATCACTATGCAGGGACCCTAAATCAAGAAATATCTCATCTTTTAGGTTACCCTACTAATCAGAGCTTTGACTATAGTGCATTGGCACCTTTACTTCATTTTCACATAAACAATGTTGGTGATCCATTTATGGGAAGCAGTTATGGTGTAAATTCAGCTAATTTTGAAGTAAGTGTGCTTGATTGGTTTGCTAAACTTTGGGAAATAAAGAAGGAAGAGTACTGGGGATACATCACAAGTGGTGGAACTGAAGGCAATTTTCATGGAATTTTATTAGGAAGGGAAAAGTTTTCAGATGGGATTATATATACTTCACAAGACTCACATTATTCAATATTCAAGATAGCAAGAATGTATAGAATGAAATGCATGAAAGTTAGCACATTGGTTACTGGTGAGATTGATTGTGCTAATCTGAAGACTCTACTTCTTGCCCACAAGGACAAGCCAGCTATTATCAATTTAAATATAGGAACAACTGTGAAAGGAGCTATTGATAACATTGATATAGTAATACAGACACTTGAGGAAAGTGGTTTTTCTCGTGATCGATTCTATATTCATTGTGACGGAGCTTTATTTGGAATGATGCTGCCACTTCTTAAACAAGCTCCAAGCATTACCTTCAAGAAGCCCATTGGAAGTATAACTATCTCTGGCCATAAGTTTCTGGGATGTCCAATTCCTTGTGGTGTTTTATTAACTCGTTTAGAACATATCAACACTTTATGTAAAGATGTTGAAGTGATTGGTTCTAGGGATACCACAATTAGTGGTAGTCGAAGTGGTCATGCTCCAATCTTTCTTTGGTATGCTTTGCAAAAAAGAGGTATCATAGGACTCCAAAATGAAGTGCATAAATGCATGATGAATGCACGTTACTTGCAACGTAAACTTCGTGATGCTGGAATTGGTACAATGTTAAATGAATTTAGCAACACAGTTGTTTTTGAGAAGCCTTTGGATATTGAGTTTATTCGAAAGTGGAGTTTAGCATATCAAGGAAATATTGCACATGTGGTGGTGATGCAACATGTTACTATTGAAATGTTGGACTCATTTGTTGATGAGTTTACTAAAAAACGAGCAATTTGGTTTCAGTATGGGTTGAGAAAGCCTATATGTCTTGCAGATGAAATTGGTGCTGAAAATTGTATTTGTTCATTGCACAATTGA 1536 0.3561 MIIWLIKMNEKSILFGTSHIFSIKEFFDGKLKNTQQEAESKRPTNCAYSQIYTNKEESMENQVQEDMKISFNIPQVHGLEPSREKDKDCKIQEENNNGHNMNLAITNCTGESQGKLAEVINHYAGTLNQEISHLLGYPTNQSFDYSALAPLLHFHINNVGDPFMGSSYGVNSANFEVSVLDWFAKLWEIKKEEYWGYITSGGTEGNFHGILLGREKFSDGIIYTSQDSHYSIFKIARMYRMKCMKVSTLVTGEIDCANLKTLLLAHKDKPAIINLNIGTTVKGAIDNIDIVIQTLEESGFSRDRFYIHCDGALFGMMLPLLKQAPSITFKKPIGSITISGHKFLGCPIPCGVLLTRLEHINTLCKDVEVIGSRDTTISGSRSGHAPIFLWYALQKRGIIGLQNEVHKCMMNARYLQRKLRDAGIGTMLNEFSNTVVFEKPLDIEFIRKWSLAYQGNIAHVVVMQHVTIEMLDSFVDEFTKKRAIWFQYGLRKPICLADEIGAENCICSLHN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3661 511 PANTHER - 83 510 - -
Mtr1g3661 511 PANTHER SERINE DECARBOXYLASE 83 510 - -
Mtr1g3661 511 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 335 356 IPR021115 GO:0016831
Mtr1g3661 511 SUPERFAMILY PLP-dependent transferases 127 480 IPR015424 -
Mtr1g3661 511 Gene3D Aspartate Aminotransferase, domain 1 395 482 IPR015422 GO:0003824
Mtr1g3661 511 Pfam Pyridoxal-dependent decarboxylase conserved domain 146 430 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mtr1g3661 511 Gene3D - 152 394 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3661 Mtr-Chr1 48284098 48288634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3661 277 432 Calmodulin-binding Proteins AT3G17760 26.404 6.08e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3661 K25193 - gmx:100784867 650.203