Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3660 ATGGCATCAAATAATTCATCCCTTAACCAAACAAAATTTGTACATCAAAACAATGACCACCATGACCAACAAAATGCAACACTAGAGATCGAAAGCGATGAATTTGATTACTCAAAAAGATCACAATGGCTACGTGCCGCAGTTTTAGGAGCTAATGATGGATTAGTTTCAACAGCATCACTAATGATGGGTGTAGGAGCAGTGAAACAAGACATAAAAGCCATGATCTTGTCAGGTTTTGCTGGACTTGTAGCTGGTGCATGTAGCATGGCAATAGGTGAGTTTGTATCTGTTTATTCACAACTTGACATTGAAATTGCTCAATTAAAAAGAGACAATATTGAAAGAGGTAATAATATTGAAGAGAAAGAAAGTTTGCCAAATCCTTTACAAGCAGCAGCAGCTTCAGCTTTAGCATTTTCAATTGGTGCAATGGTGCCACTACTTGCAGCATCTTTCATTAAAGATTATAAGGTAAGGGTAGGTGTTGTTTTGGGAGCAGTTAGTTTTGCTTTGGTTGTGTTTGGTTGGTTGGGTGCAGTGTTGGGTAAGGCTCCAGTTTTAAGGTCTTGTTTGAGGGTCTTGCTTGGAGGTTGGATTGCTATGGCCATAACTTTTGGACTAACCAAGTTGATTGGGTCAAGTGGGCTTTAG 654 0.393 MASNNSSLNQTKFVHQNNDHHDQQNATLEIESDEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQLKRDNIERGNNIEEKESLPNPLQAAAASALAFSIGAMVPLLAASFIKDYKVRVGVVLGAVSFALVVFGWLGAVLGKAPVLRSCLRVLLGGWIAMAITFGLTKLIGSSGL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3660 217 CDD Nodulin-21 42 186 - -
Mtr1g3660 217 Pfam VIT family 44 121 IPR008217 GO:0005384|GO:0030026
Mtr1g3660 217 Pfam VIT family 119 209 IPR008217 GO:0005384|GO:0030026
Mtr1g3660 217 PANTHER CCC1 FAMILY-RELATED 9 215 - -
Mtr1g3660 217 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3660 Mtr-Chr1 48279305 48280291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3660 20 217 Nodulin-like Gene Family AT3G43660 70.149 3.07e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3660 K22736 - gmx:100814343 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0966 6 12776091 12777223 Mtr1g3660 1 48279305 48280291 PCT