Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3653 ATGGATGTGAATTTGTCACAAGGAGGAATGATTCAAGGTGGTGTTGGTGGTAATTCTTTTGGTGGCTTTGATTTACCTGGATCAATTCAGGTTCATCATCAAGCACACCATCCTCATACCATTCACCAACATCAAGCTAATCCGCATCAAGGGTTGTCGCTACATTCATCGGTGCAAGATGGTTTTCCACTCACAATGGGACCTTTGCAGAACTGTGATCAGAGTATGTCAATGACAGATTATGGTAAGGGAGAGAGGGGGAAAATTTGTACAAGTGAGGAAGATGAGCCTAGTTTTATGGAGGATGGTTTTGATGGTCAACATGAAGGGGGTAGAGGTAAAAAAGGATCGTCGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAATATGGTGAGGCTTATGATTACAGCTGTTTCTTATATCGGTGAGGATAGAACTTCTGATGGTGTTGGTGGAAGTGGAAGAAGGAAATTTGCGGTTCTGCAGAAGAAGGGTAAGTGGAGATGTGTGTCGAAAGTCATGGCTGAAAGAGGTTGTCATGTTTCGCCGCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTGAATGATATGTTAGGGAGGGGAACTTCTTGCGAGGTTGTGGAAAATCCTGCGCTTTTGGATGGAATTTATTATCTTTCTGAGAAAGAAAAGGACGAAGTTCGAAAAATATTAAGCTCAAAACAATTGTTCTATGAAGAGATGTGTTCTTACCATAATTGTAATAGGCTGCATTTGCCACATGATCCTGCATTGCAATCTTCGATGCAGTTAGCTCTCCGTAATAGGGATGATCATGATAACGATGATATCAGAAGATCCCAGCTTGATGATCATGATGAAGACGAGCAAGATGCAGAAACTGATGAACACGATGCTTTTAAAGACAATTGTGCTTCCCGTGGTGAGGGGCGGTTAAATGGATCAATGAAGAAATTGAAACAAAACCAAGGCCAAAATCATGCTAATGCTTTTGGTAATTCTTTTAATTGTCAAGATTATTTCAACAAAGGCTCGTATCCGCGTGGACAAATGGGGCAGTCTGATGGTAATCAAGTTATACCTGAAAACATGAGAGCAGCATGGTTACAGAAGCAATGGGTTGACTCTCGCCAAGTTCAGTTAGAAGAGCAAAAGTTACAAATTCAGGCTGAGAAGTTGGAATTAGAGAAACAAAGATTCAAGTGGCAGAGATTTAGCAAGCAAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAACGAAAGAATGAAGCTTGAAAATGAACGTATGGCTTTAGAACTGAAGCAAAAGGAAATGAGTCTCGGCTTTAACTAG 1353 0.4109 MDVNLSQGGMIQGGVGGNSFGGFDLPGSIQVHHQAHHPHTIHQHQANPHQGLSLHSSVQDGFPLTMGPLQNCDQSMSMTDYGKGERGKICTSEEDEPSFMEDGFDGQHEGGRGKKGSSSPWQRVKWTDNMVRLMITAVSYIGEDRTSDGVGGSGRRKFAVLQKKGKWRCVSKVMAERGCHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPALLDGIYYLSEKEKDEVRKILSSKQLFYEEMCSYHNCNRLHLPHDPALQSSMQLALRNRDDHDNDDIRRSQLDDHDEDEQDAETDEHDAFKDNCASRGEGRLNGSMKKLKQNQGQNHANAFGNSFNCQDYFNKGSYPRGQMGQSDGNQVIPENMRAAWLQKQWVDSRQVQLEEQKLQIQAEKLELEKQRFKWQRFSKQKDRELEKLSLENERMKLENERMALELKQKEMSLGFN* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3653 450 Gene3D - 126 199 - -
Mtr1g3653 450 PANTHER F16F4.11 PROTEIN-RELATED 1 450 - -
Mtr1g3653 450 Coils Coil 382 409 - -
Mtr1g3653 450 MobiDBLite consensus disorder prediction 275 291 - -
Mtr1g3653 450 Pfam Myb/SANT-like DNA-binding domain 123 250 IPR044822 -
Mtr1g3653 450 MobiDBLite consensus disorder prediction 95 112 - -
Mtr1g3653 450 PANTHER FACTOR, PUTATIVE-RELATED 1 450 - -
Mtr1g3653 450 Coils Coil 412 446 - -
Mtr1g3653 450 MobiDBLite consensus disorder prediction 95 121 - -
Mtr1g3653 450 MobiDBLite consensus disorder prediction 275 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3653 Mtr-Chr1 48219433 48223888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3653 - - gmx:100816474 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3653 1 48219433 48223888 Mtr1g3653 1 48219433 48223888 ECH
Mtr6g0980 6 13081683 13084707 Mtr1g3653 1 48219433 48223888 PCT