Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3651 ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGTTCCGGTGAGAATATTGTACCGGTTACGGCGCAAAACGGAGGCGGCCGTGAAGAGAAAGGAAGAGAGGTTGGTGGTGAGGAAGATGATAAGATGAATATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGATCTTGGTTATCACAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGAAGTGGGAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCTCTTACCATCCAAAACCACAAACAAATAATAACACACCAACAACAAATCCCATTGAAACCACACAAGCAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCATTTCTCCTTCACCACAACCTAACAACAACAATGTTCCAAATTCTTTGCCAAACATGAACAACCTATTCTCGACCGCAACAACCTCGACTTCTTCTTCCACAGCTTCGGATGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAAGCCATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGAAAGAATCAGTAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAACCACCACCTCAACCACCGCTAGCACCAGAGCTGTCTGTGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAACAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATATGAATAATGGTTACAAAAGTGGTAACGGTGGCGCTTCTCCTTCTCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCACCATTATGGGAAGATATTTCAGCTGCAATGAAGAGACAAGGATACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGTCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAAGTCAAATGAGACGATGGAGCCATTGATGGTGCAGCCAGAACAACAATGGAGACCTCCAACTACATTTGAAGAGGGTGATGTGGTGAAGAAGAATGTTGATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGATGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAAGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAATTGTATGA 1698 0.3899 MQLGDATVMMETCSGENIVPVTAQNGGGREEKGREVGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLADLGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSSYHPKPQTNNNTPTTNPIETTQAISYVTTTVPSTNPTTFISPSPQPNNNNVPNSLPNMNNLFSTATTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMERISKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPLAPELSVCQTALASQVQTQQLVIPNNNIVEFQNMNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMKSNETMEPLMVQPEQQWRPPTTFEEGDVVKKNVDEAKEEDDNGDVDDDEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTIV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3651 565 MobiDBLite consensus disorder prediction 182 221 - -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 493 565 - -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 516 541 - -
Mtr1g3651 565 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 1 558 - -
Mtr1g3651 565 CDD GT1 55 119 - -
Mtr1g3651 565 Pfam Myb/SANT-like DNA-binding domain 54 140 IPR044822 -
Mtr1g3651 565 Pfam Myb/SANT-like DNA-binding domain 371 458 IPR044822 -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 21 53 - -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 28 42 - -
Mtr1g3651 565 Gene3D - 56 117 - -
Mtr1g3651 565 Gene3D - 373 434 - -
Mtr1g3651 565 SMART sant 52 114 IPR001005 -
Mtr1g3651 565 SMART sant 369 431 IPR001005 -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 501 515 - -
Mtr1g3651 565 ProSiteProfiles Myb-like domain profile. 54 112 IPR001005 -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 182 227 - -
Mtr1g3651 565 MobiDBLite consensus disorder prediction 549 565 - -
Mtr1g3651 565 ProSiteProfiles Myb-like domain profile. 365 429 IPR001005 -
Mtr1g3651 565 PANTHER - 1 558 - -
Mtr1g3651 565 CDD GT1 371 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3651 Mtr-Chr1 48174819 48178332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3651 50 493 Trihelix Transcription Factor Family AT1G76890 49.187 7.74e-140 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr1g3651 Myb_DNA-bind_4 2.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3651 - - gsj:114370603 658.292