Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3624 ATGGGCTGTGTTCAAGCCAAACCATTAGAATCTGAAGCTAACTATAGAGGACTAGACAGGTTCAAGATGGAAAATGGGTATGTTCCAAGTTCTGATTTTGTTGCACACAGAAGATCTACTGGTCAAAGTCAAAAATATGTTGCAAAGGGTAAGGATATTGATCATCATGTACATCAGAGACAACCCAGAAAGCATAAAGTAGTTGATGGCAATATTGGTGGTGCAAGAGGAAAGAGAGATGGTGAGTTGAAAGATAGTAAGAAGCAGTTGAATAGGTGTTTTGATGATGAGATGGTGGATGGTTGGCCTAAATGGTTGGTTGATAATGTTCCTTCTCAAGTGTTGGCTGGTGTTGTTGCCAAGAGTGCCGAATCTTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGACACCGGAGATATTGTGGCCCTCAAAAAGGTTCGCTTCAATACATCACAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATAACTATATTACAGAGATTGGATCATCCCAATGTAGTAAAACTTAAAGGGTTAGCAACTTCAAGAATGCAGTACAGCATATATCTAGTTTTTGATTTCATGCCAACAGATTTGTCAAGAATTATTTCTCGGCCTGGAGAAAGACTAACTGAACCACAGGTCAAATGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGCCATGATAGAGGAATTTTGCATCGAGATATAAAAGGGTCAAATCTTTTGATTGATAAAAATGGGATGCTTCAGATTGCAGATTTTGGACTTGCCAATTATTATAGTCCAAATCAAGATCAGCCTCTCACAAACAGGGTTGTGACGCTATGGTACAGAGCTCCTGAATTGTTGTTAGGTTCCACCGATTATGGAGTTGGTATTGATCTATGGAGTGTTGGATGTCTCCTTGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATAGAATTTTTAGGTTATGTGGCACACCGTCGCAAGAGTATTGGAGAAAGCTGAAACTTTCTACAACTTTTGTACCTCTGAAGTCTTATAGACCAAGTCTGGTAGAAACTTTCAATGATCTGCCCCCATCTTCTTTAGGTCTTTTATGTACTCTTCTTGCTTTGGATCCTGCATTCCGCGGTAGTGCGTCTAAAGCTCTTAAAAATCCGTTTTTCTTTACAAGCCCATTGGCTTGTGATCTATCTGGTCTGCCTGCAATCTACAAAGAAGAAGATGAGCATACTCCAGCTAAAGAACAGATAAAGTATATTAACTCTAAAATCAGGCGTTCTCGTACATTTATGGAGCGTCGCAAGAATTTAGCATCTAATAGGCCAATAGAACATACTGTATCCTCAAAAGAGGTACTCAGAAATAATGCTGAGGCTGAAACTTATGTTCCAAGTGAAGAACCAGGTAGTGCAACAAGTAGTACTTCATCAAGTGTAAACCAAGCTGGAGTTGGGGACCACTCACCCCTATTTCTCTCTCCATTTCTTGGTTCTGATCAAAAGCAACCCCACAAAATCCATAGTAGGCGTGCAAATATTGGTGAAAAAAACATCAAGAACCTTCCTCCATTATCCAAGCCAAAACCAAATGCAACCAAGAAAGATGATGGCAGATACAGAACAGACCAGATTTTCAGGTCCACTTCCACCAGAGAATTTAGAAAATTAAAAACAGAAGAACATTTACTCTTTGATTAG 1758 0.3931 MGCVQAKPLESEANYRGLDRFKMENGYVPSSDFVAHRRSTGQSQKYVAKGKDIDHHVHQRQPRKHKVVDGNIGGARGKRDGELKDSKKQLNRCFDDEMVDGWPKWLVDNVPSQVLAGVVAKSAESYKMIDKVGQGTYSNVYKALDRDTGDIVALKKVRFNTSQPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMPTDLSRIISRPGERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLQIADFGLANYYSPNQDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSVGCLLAEMFKGIPIMPGRTEVEQLHRIFRLCGTPSQEYWRKLKLSTTFVPLKSYRPSLVETFNDLPPSSLGLLCTLLALDPAFRGSASKALKNPFFFTSPLACDLSGLPAIYKEEDEHTPAKEQIKYINSKIRRSRTFMERRKNLASNRPIEHTVSSKEVLRNNAEAETYVPSEEPGSATSSTSSSVNQAGVGDHSPLFLSPFLGSDQKQPHKIHSRRANIGEKNIKNLPPLSKPKPNATKKDDGRYRTDQIFRSTSTREFRKLKTEEHLLFD* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3624 585 MobiDBLite consensus disorder prediction 461 475 - -
Mtr1g3624 585 MobiDBLite consensus disorder prediction 455 564 - -
Mtr1g3624 585 MobiDBLite consensus disorder prediction 549 564 - -
Mtr1g3624 585 ProSiteProfiles Protein kinase domain profile. 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3624 585 Gene3D Phosphorylase Kinase; domain 1 115 208 - -
Mtr1g3624 585 PANTHER CYCLIN-DEPENDENT KINASE 1 551 - -
Mtr1g3624 585 PANTHER CELL DIVISION PROTEIN KINASE 1 551 - -
Mtr1g3624 585 MobiDBLite consensus disorder prediction 486 504 - -
Mtr1g3624 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Mtr1g3624 585 Pfam Protein kinase domain 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3624 585 SMART serkin_6 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3624 585 SUPERFAMILY Protein kinase-like (PK-like) 122 412 IPR011009 -
Mtr1g3624 585 Gene3D Transferase(Phosphotransferase) domain 1 209 444 - -
Mtr1g3624 585 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3624 Mtr-Chr1 47890299 47894267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3624 120 469 Core Cell Cycle Gene Families AT5G10270 42.391 1.07e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr1g3624 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3624 K08819 - gmx:100776854 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3624 1 47890299 47894267 Mtr1g3624 1 47890299 47894267 ECH