Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3604 ATGAGCTCCAAAGCTCCCCAAACTGATTCAATTGATGCATTGAGCTTTAAAATGGCTTCTCATAAGGATCATGATAATAAGTTCTACATGTCTATCAGTCAAGGAGAGGATAACCACCCATTTGACTATTTTCGTGCTCTGTATGAGGGTTGCATTGCTGGAGGTGTTGCTGGTGTTGCTGTAGAAGCAGCTTTATACCCCATTGATACCATCAAAACTCGACTGCAGGTTGCTCGTGCTGGAGTAAATATTGCTTTCAAGGGTTTGTATTCTGGATTGGCTGCAAATCTTGCTGGTGTGTTACCAGCTTCTGCGATTTTTATTGGTGTGTACGAACCAACAAAGCATAAATTGCTGAAGATCTTCCCTGAGAATCTAAGCGCTTTGGCTCATATTGCTGCAGGTACTATTGGAGGAGCCGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATACAAATTGGTCAATTCAAATCAGCCCCTGATGCTGTCCGTCTTATCATTGCTAATGAGGGTTTTAAAGGTCTTTATGCGGGATATAGATCTTTCTTATTGAGAGATTTACCATTTGATGCTTTAGAATTATGCATCTATGAACAGCTCCGTATCGGGTATAAACTAGCGGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGCTTGGGGCATTTGCTGGTGCCATAACTGGAGCAGTTACGACTCCTCTTGATGTAGTAAAAACCAGATTAATGGTTCAGGGAACACAAAAACATTACAAAGGCATTTATGATTGTGTGAGGACAATAGTTAAAGAAGAAGGAGCTAATGCTCTTTTTAAGGGTATTGGGCCAAGAGTGGTGTGGATAGGAATAGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAATTCTTGCTCAGAAGCACCCTCCAAATGATGCTCAGGAGTGA 948 0.4114 MSSKAPQTDSIDALSFKMASHKDHDNKFYMSISQGEDNHPFDYFRALYEGCIAGGVAGVAVEAALYPIDTIKTRLQVARAGVNIAFKGLYSGLAANLAGVLPASAIFIGVYEPTKHKLLKIFPENLSALAHIAAGTIGGAASSLVRVPTEVVKQRIQIGQFKSAPDAVRLIIANEGFKGLYAGYRSFLLRDLPFDALELCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGTQKHYKGIYDCVRTIVKEEGANALFKGIGPRVVWIGIGGSIFFGVLEKTKKILAQKHPPNDAQE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3604 315 Gene3D Mitochondrial carrier domain 49 314 IPR023395 -
Mtr1g3604 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 117 IPR018108 -
Mtr1g3604 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 208 IPR018108 -
Mtr1g3604 315 Pfam Mitochondrial carrier protein 126 206 IPR018108 -
Mtr1g3604 315 Pfam Mitochondrial carrier protein 221 307 IPR018108 -
Mtr1g3604 315 Pfam Mitochondrial carrier protein 49 80 IPR018108 -
Mtr1g3604 315 Pfam Mitochondrial carrier protein 86 120 IPR018108 -
Mtr1g3604 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 303 IPR018108 -
Mtr1g3604 315 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 314 - -
Mtr1g3604 315 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 3 314 - -
Mtr1g3604 315 SUPERFAMILY Mitochondrial carrier 49 298 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3604 Mtr-Chr1 47758687 47765414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3604 124 315 Chloroplast and Mitochondria Gene Families AT1G07030 30.500 5.02e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3604 K15111 - gmx:100800051 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3604 1 47758687 47765414 Mtr1g3604 1 47758687 47765414 ECH