Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3602 ATGCCTGAATCGGAGTCAGGGACACCGACGGCAGCGTCGGTGCCGGCGACACCGGATACTCCGGGAGGGCCATTATTCTCATCTATAAGAATTGATTCACTTGATCAACGTGAGTCATTTGCAATGGGGAGGTGCAACATGTGTATGCCGGGTGGTAAAAGCAATAGTTGCATCGCTAATTTCTCTGCTGGAGTTCGAGTTCCAAGTGTCTCTCTCACTCAGAAGATTGGAGCAGAGTTTGTAGGAACGTTCATATTAATATATGCAGCAACAGCAGGACCAATAGTGAACAACAAATACAATGGAGTAGAAACTCTTATGGGAAATGCAGCTTGTGCTGGACTGACAGTCATGTTCATTATTCTCTCAATTGGTCATATCTCAGGTGCTCATCTCAATCCATCACTCACCATTGCCTTCGCGGCATTTCGCCATTTTCCCTGGGCACATGTTCCAGCCTACATTGCAGCACAAGTCTCTGCTTCGATCTGTGCTTGTTATGCGCTCAAAGGCGTTTACCATCCTTTCCTCTCTGGTGGTGTCACTGTCCCTACTGTTAGCGTTGGACAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGTTACTGCTGTTGCTACTGATTCCCGTGCGGTTGGTGAATTGGCTGGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTTATCTCAGGGCCAACAAGTGGTGGTTCCATGAATCCAGTGCGCACCTTAGGTCCAGCCGTTGCAGCAGGAAATTACAAGCATCTCTGGATATATTTGGTGGCGCCAACGCTTGGTGCTCTAGCTGGTTCTGGAGTTTATACGCTTATCAAGCTACGTGACAACGGAGCTGAACCACCTCAACCAGTTAGGAGCTTCCGTCGCTAG 903 0.474 MPESESGTPTAASVPATPDTPGGPLFSSIRIDSLDQRESFAMGRCNMCMPGGKSNSCIANFSAGVRVPSVSLTQKIGAEFVGTFILIYAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIAAQVSASICACYALKGVYHPFLSGGVTVPTVSVGQAFATEFIITFILLFVVTAVATDSRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHLWIYLVAPTLGALAGSGVYTLIKLRDNGAEPPQPVRSFRR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3602 300 MobiDBLite consensus disorder prediction 1 24 - -
Mtr1g3602 300 PANTHER AQUAPORIN NIP2-1 10 297 IPR034294 -
Mtr1g3602 300 Pfam Major intrinsic protein 69 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g3602 300 PANTHER AQUAPORIN NIP5-1-RELATED 10 297 - -
Mtr1g3602 300 Gene3D Glycerol uptake facilitator protein. 59 293 IPR023271 -
Mtr1g3602 300 MobiDBLite consensus disorder prediction 1 15 - -
Mtr1g3602 300 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Mtr1g3602 300 SUPERFAMILY Aquaporin-like 69 286 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3602 Mtr-Chr1 47735718 47741058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3602 25 300 Major Intrinsic Protein MIP AT4G10380 71.530 9.30e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3602 K09874 - gmx:100804356 523.472