Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3576 ATGATGGAGTATCATATCTTACTATTATTCACCACCCTATCCCTTATCATAATCCGGTTCTTCCTAAACCGCCAAAAGAATAAACCACCCGGTCCAACCGGTCTTCCCATAATCGGAAACCTCCACCAACTCGGCTCAAAACCCCACTGCACCCTCTCTTCCCTCGCCAAAACCTATGGCCCCATCATGTCCCTCCGCTTCGGCTCCGTCACCGTCACCGTTGCTTCCTCCCCGAAAACCGCCCAAGAAATCCTCCAAAAAAACGACCAATCCTTCGCCAACCGCCCTATCCCTGAATCAGTTGCTGCTCAACCCAACGTCAACGACACACTCGCATGGTCCCATGCCGACTCACGGTGGCGTAACCGTAGACGTATCTGCACCACACAAATATTCACCACCCACCGCCTTGACCTTCTCCAACATCTCCGTCACCGGAAAGTTGAGCAACTAGTCCAACACCTTCACAAAAAAGCAGCAGAGAAAACAACCGTTGACATAGGTGAACTTGCTTTCGCCACCATGTTGAACTTGGTTTCCAACACGGTGTTCTCAGAGGACCTTGTTGATTCGGAGTTCGAGAGTGCTGGTGAGTTTAAAGAGCTTGTATGGAGGATAATGGAAGATGCTGGGAAAGTGAATGTTTCTGATTATTTTCCAGTGGTGAAGATGTTTGATCTGCAAGGTGTGAAGAGACACGTTAAGGTTTCATATGTAAGATTGCATGAGATTTTTGATCGTATGATTCAAAAACGTGTTGAAGATAGAAATAGTAATTCGCATGATGGTGGCGTGGTTGCTGGTGATTTCTTGGATGTTTTGCTTGATCATTGTCAACAAGAGGATGACTCTGTTTTTAGCGTTGAAAGCATCAAGCCATTGATTCTGGACTTATTCATAGCTGGAAGTGACACATCAGGATCAACAACTGAATGGGCAATGGCAGAGCTTCTCCGCAATCCAAACATAATGAAAAAAGCAAGAAATGAAGTGATTCAACTAATTCCCAAATCCAACCAAGTCAAAGAATCAGACATTCCTTCACTTCCATACATCCAAGCAATAGTCAAAGAAACCCTTAGGCTTCATCCTCCTGTACCACTTCTCTTACCTTATATTGCAGCAAATAATGTTGAAATAAATGGTTACACAATTCACAAAGGAAACCAAGTTTTAATAAATGCATGGTCTATAGGAAGAAACCCCGAGTTTTGGGAGGATCCGTTGTTGTTTCAACCAGAAAGGTTTCTTAATTCGAATGTAGATTTTAAAGGGAGAGATTTTGAGTATTTACCTTTTGGTGCCGGAAGGAGAATTTGTCCTGGTATTCCACTTGCTAATAGAATGATTATTTTGATGTTGGCTGTGTTGTTGCATTCTTTTGAATGGGAGCTTCCTAAAGGTGTTAGTCCTGAAACGCTTGATATGAGTGAGCAATATGGAATCACATTGAAGAAGCTTATTCCTCTTTCTGCTGTTCCAATTTCAGTAGTAGTATGA 1500 0.4307 MMEYHILLLFTTLSLIIIRFFLNRQKNKPPGPTGLPIIGNLHQLGSKPHCTLSSLAKTYGPIMSLRFGSVTVTVASSPKTAQEILQKNDQSFANRPIPESVAAQPNVNDTLAWSHADSRWRNRRRICTTQIFTTHRLDLLQHLRHRKVEQLVQHLHKKAAEKTTVDIGELAFATMLNLVSNTVFSEDLVDSEFESAGEFKELVWRIMEDAGKVNVSDYFPVVKMFDLQGVKRHVKVSYVRLHEIFDRMIQKRVEDRNSNSHDGGVVAGDFLDVLLDHCQQEDDSVFSVESIKPLILDLFIAGSDTSGSTTEWAMAELLRNPNIMKKARNEVIQLIPKSNQVKESDIPSLPYIQAIVKETLRLHPPVPLLLPYIAANNVEINGYTIHKGNQVLINAWSIGRNPEFWEDPLLFQPERFLNSNVDFKGRDFEYLPFGAGRRICPGIPLANRMIILMLAVLLHSFEWELPKGVSPETLDMSEQYGITLKKLIPLSAVPISVVV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3576 499 Pfam Cytochrome P450 29 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 495 - -
Mtr1g3576 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Mtr1g3576 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 495 - -
Mtr1g3576 499 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 SUPERFAMILY Cytochrome P450 21 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 Gene3D Cytochrome P450 19 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3576 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3576 Mtr-Chr1 47500817 47503854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3576 23 495 Cytochrome P450 AT2G45550 43.460 2.21e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3576 - - vra:106769993 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3576 1 47500817 47503854 Mtr5g0154 5 1420133 1422117 ECH
Mtr1g3576 1 47500817 47503854 Mtr1g3576 1 47500817 47503854 ECH