Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3575 ATGGGTTTACCGTCATCCTCATTAGAAACAAATTGGTGGATGTTTACACTTCCACCCATAGCACTTAACAATCTCCTCTTGGTAATCCTACTTGCACTGTTTTCCATTGCATTTCTAAAATGGACAATCCCAAAAGGAGGTATAGCTTGGAGAAATAAAAGAAACCAAATGGGTCAAATCCCTATACAAGGACCAAAAGGACTCCCAATATCTGGCATGTTATTCACCTTAAACCATAACCTACCTCACCGTACACTTGCATCCATAGCTTCAACCCTATCATCCACAAAACAACTCATGGCCTTTAGTTTAGGCTCAACCCCTGCAGTTATCACCTCAAACCCTCACATAGCACGTGAAATATTGAACTCGCCACATTTTTCAAACCGTCCCATTAAACAATCTGCTAAAAGCCTTATGTTTAGTCGTGCCATTGGTTTTGCACCAAACGGAACATATTGGCGTTTGCTACGTAAAGTAGCATCAACTAACCTTTTCTCTCCACGACGCATTATAGCCCACGAAGCTGGTCGTAGGCTAGATTGCGCCGTCATGTTATGCTCCATAGCTAATGAACAATCCAATCATGGATTTGTTTGTCTAAGAAAGCACCTTCAAGATGCAGCTCTCAATAACGTTATGGGCACTGTTTTTGGAAAAAGATTATACGACCAAGAACAATGTCACGTTAAAGAGCTGCATGAGATGGTGAGGGAAGGGTTTGAGCTTTTGGGAGCTTTCAATTGGTCTGATTATGTGCCTTGGATTAGCTTCTTTTATGATCCTTATCATATTCGCGAACGGTGCTTGGCTCTTGCTCCCCGTGTTAAGAAATTTGTAAAGAAGATTTTGGATGAACATCGAATTGCTCCTTCTAAGATGCTTTCGGATGACTCTGACTTTGTAGATGTTCTACTCTCTCTTAAAGGTGATGAGAAGCTCCAAGAGGACGACATCATTGCCATTCTATGGGAGATGATATTTCGTGGCACGGATACAACAGCACTTCTTACTGAATGGATAATGGCAGAGCTTATTTTGAACCAACAAATCCAAACAAGACTTCGAGAAGAGCTTGACAACGTTGTAGGAGACAAAGACAACGTTACAGATGCTGATATCACAAAAATGCCATACCTAGAAGCCATAGTGAAAGAAACATTGAGACTTCATCCAATTGGCCCTCTACTTTCGTGGGCCCGTTTATCCACATCAGATGTCCAGCTCAGCAATGGAATGGTGGTCCCTACTAACACAACAACAATGGTCAACATGTGGGCCATAACCCACGATCCCAATGTGTGGACCAATCCATTTGCCTTCAAGCCTGAGAGGTTTTTGAAGAATGAAGGAGGTGTAGAAATGGATGTGAGGGGTGTTGATTTAAGGCTTGCACCTTTTGGAGCTGGTCGTAGGGTTTGCCCTGGTAGGAACCTAGGGCTTGTGACTGTCAGTCTTTGGGTGGCTAGATTGGTTCACAAGTTTCAATGGGTTCAAGATATGGATAATCAAGTTGACCTCACTGAGGTGCTCAAGCTATCTTGTGAGATGAAGAACCCTCTCAAAGTTGTGGCTATTCCTAGACTTGTTTAA 1593 0.4262 MGLPSSSLETNWWMFTLPPIALNNLLLVILLALFSIAFLKWTIPKGGIAWRNKRNQMGQIPIQGPKGLPISGMLFTLNHNLPHRTLASIASTLSSTKQLMAFSLGSTPAVITSNPHIAREILNSPHFSNRPIKQSAKSLMFSRAIGFAPNGTYWRLLRKVASTNLFSPRRIIAHEAGRRLDCAVMLCSIANEQSNHGFVCLRKHLQDAALNNVMGTVFGKRLYDQEQCHVKELHEMVREGFELLGAFNWSDYVPWISFFYDPYHIRERCLALAPRVKKFVKKILDEHRIAPSKMLSDDSDFVDVLLSLKGDEKLQEDDIIAILWEMIFRGTDTTALLTEWIMAELILNQQIQTRLREELDNVVGDKDNVTDADITKMPYLEAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMVVPTNTTTMVNMWAITHDPNVWTNPFAFKPERFLKNEGGVEMDVRGVDLRLAPFGAGRRVCPGRNLGLVTVSLWVARLVHKFQWVQDMDNQVDLTEVLKLSCEMKNPLKVVAIPRLV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3575 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Mtr1g3575 530 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 Pfam Cytochrome P450 63 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PANTHER CYTOCHROME P450 78A7-RELATED 1 528 - -
Mtr1g3575 530 SUPERFAMILY Cytochrome P450 64 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 Gene3D Cytochrome P450 51 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3575 530 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3575 Mtr-Chr1 47488574 47491543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3575 6 524 Cytochrome P450 AT5G09970 62.453 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3575 K20619 - pvy:116124806 732.635