Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3573 ATGGAGGAGACAAAGTTCTGTGCTTTAGCTTTCATTTGTGCCTTCTTTCTGCTGTTGCTTCATCCATTATGGCTGGTTTCTGCTAACATGGAAGGTGATGCTTTACATAACTTGAGGACAAATTTACAAGATCCTAATAATGTTTTGCAAAGTTGGGATCCTACACTTGTTAATCCTTGTACATGGTTTCATGTAACCTGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGCTTTATCGGGCACACTAGTTCCACAGCTCGGGCAACTCAAGAATTTGCAGTATCTGGAACTTTACAGCAATAACATCACTGGTCCTATTCCAAGTGACCTGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAATCGGTTCAATGGCCCTATCCCGGATTCATTGGGCAAGTTGTCAAAATTGCGTTTTCTGCGGCTTAATAACAACAGCTTGATGGGTCCTATTCCCATGTCACTGACTAATATTTCAGCTCTACAAGTTCTGGATTTGTCTAATAACCAGCTCTCAGGTGTGGTTCCGGATAATGGCTCCTTTTCGTTATTCACCCCTATCAGTTTTGCAAACAACTTGAATCTATGTGGACCTGTTACCGGGCATCCTTGTCCAGGCTCTCCTCCATTTTCTCCACCTCCCCCATTTGTCCCTCCACCTCCAATCTCTGCCCCAGGAAGTGGCGGTGCAACTGGAGCAATAGCTGGAGGAGTTGCTGCCGGTGCTGCTCTATTATTTGCCGCACCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTTGATGTTCCTGCTGAAGAGGATCCTGAAGTTCATCTTGGGCAGCTTAAGAGGTTCTCACTCCGAGAGTTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGAGGAGGGTTTGGCAAGGTGTACAAAGGACGTTTGGCTGACGGTTCACTGGTTGCTGTCAAAAGATTAAAAGAGGAGCGGACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTGCATAGAAATCTCCTCCGTTTACGCGGGTTTTGTATGACACCAACCGAAAGGTTACTGGTTTATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAGCGTCCTCCACATCAAGAACCACTAGATTGGCCAACAAGAAAAAGAATAGCTTTGGGATCAGCTAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAAATCATTCATCGTGACGTGAAAGCTGCTAACATATTGTTGGATGAAGAGTTTGAGGCTGTTGTGGGGGATTTTGGATTGGCAAAACTTATGGATTACAAGGACACCCATGTTACAACTGCTGTTCGGGGTACAATTGGGCATATAGCTCCCGAGTACCTATCTACTGGCAAGTCTTCAGAGAAAACTGATGTTTTTGGTTATGGTATCATGCTTCTTGAGCTTATAACTGGACAAAGAGCTTTTGACCTTGCTCGACTTGCGAATGATGATGATGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAAAAGCTTGAAATGTTGGTTGATCCCGATCTTAAAACCAACTACATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCGCTGCTATGCACGCAAGGTTCGCCTATGGACCGGCCAAAGATGTCAGATGTAGTGAGAATGCTTGAAGGCGATGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAAGGGGAAGTTCTACGCCAGGAAGTGGAATTGGCACCTCATCCCAATTCTGATTGGATTGTTGACTCTACTGAAAATCTACATGCAGTCGAATTATCTGGTCCAAGATGA 1884 0.4443 MEETKFCALAFICAFFLLLLHPLWLVSANMEGDALHNLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNRFNGPIPDSLGKLSKLRFLRLNNNSLMGPIPMSLTNISALQVLDLSNNQLSGVVPDNGSFSLFTPISFANNLNLCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGSGGATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLKTNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKGEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3573 627 SUPERFAMILY L domain-like 32 200 - -
Mtr1g3573 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mtr1g3573 627 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Mtr1g3573 627 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
Mtr1g3573 627 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3573 627 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 10 627 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mtr1g3573 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 627 - -
Mtr1g3573 627 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Mtr1g3573 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mtr1g3573 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Mtr1g3573 627 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Mtr1g3573 627 ProSiteProfiles Protein kinase domain profile. 304 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3573 627 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3573 Mtr-Chr1 47463805 47468697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3573 11 627 Receptor kinase-like Gene Family AT1G71830 89.465 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr1g3573 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3573 K13418 - gmx:100789884 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3573 1 47463805 47468697 Mtr1g3573 1 47463805 47468697 ECH