Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3562 ATGGAGCCTTTCTCTTCCACTAAACAAAATCATAACAACAACAACACTCTAACTAAACCTTCTCTTCATGTTGAATCTCCACCACTTGAACCTAGTCCTCTCCGTAAGATCATAGTCGTTGCTTCCATAGCAGCAGGTGTTCAGTTTGGCTGGGCCCTACAGCTTTCACTTTTAACTCCCTATGTTCAGTTACTCGGTATCCCCCATACTTGGGCCGCATACATCTGGCTCTGCGGCCCAATCTCGGGGATGCTTGTCCAACCGATTGTCGGTTATCACAGTGATCGTTGCACTTCACGCTTCGGTCGCCGTCGTCCGTTCATCGCTGCAGGATCATTCGCCGTCGCTATTGCCGTTTTCCTTATCGGCTATGCTGCTGACCTTGGTCACAGCTTCGGCGATGACTTATCAAAAAAAGTCCGTCCACGTGCAATAGGAATCTTCGTCGTTGGTTTCTGGATCCTCGACGTCGCTAACAACATGCTTCAAGGTCCTTGCCGTGCACTTCTTGGTGACCTCTGCGCCGGTAACCACCAAAAAACAAGAAACGCAAACGCGTTTTTCTCGTTTTTTATGGCCGTCGGTAACATCCTCGGTTACGCCGCCGGTGCTTACAGCAAACTCTTTCACGTGTTTCCGTTCACCAAAACAAAAGCATGTGATATCTACTGTGCAAATTTGAAAAGCTGTTTCTTCCTCTCAATCGCACTTTTAACCGCCGTAGCAACCGCCGCACTGATCTACGTGAAAGAAATACCACTCTCGCCGGAAAAAGTCACCGGTAACGGTGTAACCGACGAAGACGGTAACGTTACAAAGAGTAGTAACCCATGTTTCGGGGAATTATCCGGTGCTTTTCGCGAACTAAAGCGTCCCATGTGGATCTTACTATTGGTGACGTGTCTCAACTGGATTGCGTGGTTTCCTTTCTTACTATTCGATACTGATTGGATGGGGAAAGAGGTTTATGGAGGAACGGTTGGGGAAGGTCATGCGTATGATAAAGGTGTGCGCGCGGGTGCATTGGGTCTTATGCTAAACTCTGTCGTTTTGGGTGCCACGTCACTAGGAGTTGATGTGTTGGCGCGTGGTGTTGGTGGTGTGAAGAGGTTATGGGGTATTGTTAACTTCCTGCTTGCAATTTGTTTGGCTATGACTGTTTTGGTTACTAAATTGGCTCAGCATTCGCGAGTATACGCGGATGCTAGCCATACCGATCCTCTTCCACCTTCCGGTGGCATCACTGCCGGTGCGTTGGCTCTCTTTTCCGTTCTCGGAATTCCTCTCGCGATCACTTACAGCATACCCTTTGCTCTAGCATCAATATTCTCCAGCTCCTCAGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTCAATCTTGCTATTGTCATACCACAGATGATTGTCTCTGTTCTGAGTGGACCATGGGATGCTCTGTTTGGAGGTGGTAACCTGCCAGCTTTTGTGGTGGGTGCCGTGGCGGCTCTAGCAAGTGGCATATTATCCGTAGTCTTACTTCCATCTCCACCACCAGACTTGGCCAAGTCTGTAACCGCTACAGGAGGAGGCTTTCATTAA 1578 0.4892 MEPFSSTKQNHNNNNTLTKPSLHVESPPLEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSFAVAIAVFLIGYAADLGHSFGDDLSKKVRPRAIGIFVVGFWILDVANNMLQGPCRALLGDLCAGNHQKTRNANAFFSFFMAVGNILGYAAGAYSKLFHVFPFTKTKACDIYCANLKSCFFLSIALLTAVATAALIYVKEIPLSPEKVTGNGVTDEDGNVTKSSNPCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGHAYDKGVRAGALGLMLNSVVLGATSLGVDVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKLAQHSRVYADASHTDPLPPSGGITAGALALFSVLGIPLAITYSIPFALASIFSSSSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSVVLLPSPPPDLAKSVTATGGGFH* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3562 525 PANTHER SUGAR TRANSPORTER 26 516 - -
Mtr1g3562 525 Gene3D MFS general substrate transporter like domains 35 259 IPR036259 -
Mtr1g3562 525 SUPERFAMILY MFS general substrate transporter 35 510 IPR036259 -
Mtr1g3562 525 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g3562 525 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 26 516 - -
Mtr1g3562 525 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 511 IPR005989 GO:0005887|GO:0008515|GO:0015770
Mtr1g3562 525 MobiDBLite consensus disorder prediction 1 28 - -
Mtr1g3562 525 CDD MFS_SLC45_SUC 37 501 - -
Mtr1g3562 525 Pfam MFS/sugar transport protein 45 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3562 Mtr-Chr1 47319040 47322216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3562 30 525 Sucrose Transporter Gene Family AT1G22710 69.384 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3562 K15378 - gmx:547679 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3562 1 47319040 47322216 Mtr1g3562 1 47319040 47322216 ECH