Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3519 ATGGGGAGGAAAGGAAGTTGGTTTTCTGCGGTGAAGAAACTTTTCATTTCTGATTCTAAAAAAGATCAGAAACATCTTCATAAGTCGAATTCGAAGTTAACATGTTTTGGGCATCCGCAGCATCATCATCACCATCATCATCATCATTATGAGGATGCTGAGTGGAAATCTGGAGGAGTATCACCAATAACTGTTGTTCCGGTTCCATCTCTTCCTCCAAAAGAAGATGTTAAACCAAAGAAAACTGATGCAGAGAATGAACAGGACAAACAAGCCTTTTCATTGATTCTAGCCACAGCTGTTGCTACAGGCGCGGCCGTTGCTGCTGCTAAGACTGCTGCTCAGGCTGCTGCAGAGGCTGCTTTAGAGGCTGCTCGTATCACAAGTCTTCGTCCTTGTTACATTGGAAAAACTAATGAAGAAATAGCGGCTATCAAAATTCAAACTGCATTCCGTGGATATTTGGCAAGGAGGACCTTGCGTGGATTGAGAGGTTTGGCGAGGTTGAAAGCATTGGTAAAAGGACAATCTGTTCAGCGGCAAGCGGCTACTACTTTACAATGCATGCAAACTCTTTCGCGATTGCAATCTCAAGTTAGTGCGAGGAAAATCAGAATGTCTGAGGAGAATCAATCTTTTCAACGCCAATTGCAGCAGAAACGTGAAAAGGAACTTGACAAGTTACAAGCTGCTCCTATTGGAGAAAAATGGGATTATAGTTCACAATCAAAGGAGCAAATCCAAGCAAGATTGTTGAATAGACAAATTGCTGCTATGAGAAGAGAAAAGGCTTTGGCTTATGCATCAACACATCAGCAAACATGGAGGAACTCTTCAAAAGCTACAGATGCCACAATTATGGATCCAAACAATCCCCATTGGGGATGGAATTGGCTTGACAGATGGATGGCTTCAAGGCCATGGGAAGGACAAAACACTAAAGATCAGAAGAATCATAGATCAGGAAAAGGTGTTGCAAGCCATACCATGTCAGTTGGAGAAATCTCCAAATTATATGCTCTAAGAGATCAAAATCAAGATGACAAAAAATCTCCTACAAGCCAAAAAGCAAATAATCCAAACCAAGCTTCAAGGGTAGCAGTACCTTCAACATCTACTAGAGGAAAAGCTAAGACATCATCAAGTCCAAGAGTTGGTTCTTGGGGTGGTGATGGTGACTCAAAATTCACATTCAACAAAAATTCCGAAAGTAATCGTCGTCATAGCATTGCGGTGGCTCCGGTGAAAGAGGATGAAAGTCTTGTAAACACACCTGCAAAATTTTCAAAGGTTAAATCTAACGTGCAAAGTCCTTCTGTAAAGAAGCAGCTTTCTTTCACAGCTTCTTCATCTGGTTCTAGAAGGCACTCTATTCCAACTAAGATGGGAATGAATTCTAATAAAAATGTTGCTGCTACTATCCCTGAAGTGAAAGTGAAAAATGGAGGGAGCAAATAG 1458 0.4136 MGRKGSWFSAVKKLFISDSKKDQKHLHKSNSKLTCFGHPQHHHHHHHHHYEDAEWKSGGVSPITVVPVPSLPPKEDVKPKKTDAENEQDKQAFSLILATAVATGAAVAAAKTAAQAAAEAALEAARITSLRPCYIGKTNEEIAAIKIQTAFRGYLARRTLRGLRGLARLKALVKGQSVQRQAATTLQCMQTLSRLQSQVSARKIRMSEENQSFQRQLQQKREKELDKLQAAPIGEKWDYSSQSKEQIQARLLNRQIAAMRREKALAYASTHQQTWRNSSKATDATIMDPNNPHWGWNWLDRWMASRPWEGQNTKDQKNHRSGKGVASHTMSVGEISKLYALRDQNQDDKKSPTSQKANNPNQASRVAVPSTSTRGKAKTSSSPRVGSWGGDGDSKFTFNKNSESNRRHSIAVAPVKEDESLVNTPAKFSKVKSNVQSPSVKKQLSFTASSSGSRRHSIPTKMGMNSNKNVAATIPEVKVKNGGSK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3519 485 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Mtr1g3519 485 MobiDBLite consensus disorder prediction 19 86 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 433 485 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 270 286 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 351 387 - -
Mtr1g3519 485 Coils Coil 203 223 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 309 329 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 433 472 - -
Mtr1g3519 485 Pfam IQ calmodulin-binding motif 143 161 IPR000048 GO:0005515
Mtr1g3519 485 MobiDBLite consensus disorder prediction 270 290 - -
Mtr1g3519 485 MobiDBLite consensus disorder prediction 344 405 - -
Mtr1g3519 485 PANTHER IQ-DOMAIN 5-RELATED 1 478 - -
Mtr1g3519 485 Gene3D iswi atpase 137 164 - -
Mtr1g3519 485 SMART iq_5 139 161 IPR000048 GO:0005515
Mtr1g3519 485 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3519 Mtr-Chr1 46749386 46751913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3519 1 483 IQD Protein Family AT5G03040 38.767 2.42e-92 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3519 - - gmx:100807725 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3519 1 46749386 46751913 Mtr1g3519 1 46749386 46751913 ECH