Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3508 ATGGGTTATTCCATATTCTATATTGTTTTGTTTGTGTCCATTTTCTGTGTTGGAATTTCATTGGCTTCTTCTATAGAAGATCAAAAGAGAGATAAGATTAGGCAGTTACCAGGGCAACCAAAGAATGTTGGATTTGAACAGTATTCAGGCTATGTGACTGTGAATGAACAGAGTGGAAGGGCACTGTTTTACTGGTTAATTGAAGCACCACTGAACCGTGGACCCAATTCAAGGCCATTAGTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGCTTCTGAAGAAATTGGTCCTTTTCGTATTAGGCCTGATGGCAAATCACTTTTCTTGAATCGTTATGCTTGGAACAATTTGGCAAATATACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCTTATTGTAATAAAACAACAGATCTGTACACATTTGGTGACCAGAAAACAGCTGAGGATGCATATATCTTTCTAGTTAATTGGTTTGAAAGATTTCCTCAATATAAGCATAGAGAATTCTACATCGCTGGGGAAAGTTATGCAGGTCATTATGTTCCTCAATTGGCTCAAATTGTTTACCAGAGAAATAAAGGAATCAATAATCCAACTATCAATTTTAAGGGAATTATGGTTGGAAATGGTGTTACCGATGATTATCATGATTATGTTGGGACATTTGAGTACTGGTGGACACATGGTTTAATTTCAGATTCTACATATAGGATTCTAAGAATTGCATGTGATTTTGGATCATCTCTGCATCCATCAGTGCAATGTTTTCAGGCTCTTAGAGTAGCAGTTGCTGAACAAGGAAACATTGATCCATATAGCATTTATACTCCGCCTTGTAACAATACCGCATCACTCAGAAGTGGCTTGAACGGTCGTTATCCATGGATGTCTAGAGCATATGATCCGTGTACCGAAAGGCATTCTGATGTGTATTTCAATCGTCCAGAAGTGCAGAAGGCGCTTCATGCCAATGTTACAGGGATTCCATATATTTGGAAGACATGCAGTGATATTGTTGGGAATTATTGGACTGATTCCCCATTGTCTATGCTTCCTATATATCATGAACTTATCAATGCTGGTCTCCGGATATGGGTATTCAGTGGAGACACTGATTCTGTAGTTCCACTGACCGCAACTCGATATTCTATCGATGCCTTGAAGCTACCAACCATAATCAATTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGATGGAGTCAAGTTTATAAAGGGCTCACACTGGTAACAATAAGAGGTGCTGGACATGAGGTTCCTCTTCATAAGCCTCGCGAAGCGTTTATTCTTTTCAGATCATTCTTGGAGAACAAGGACATGCCATCATCAAGCTAA 1380 0.3935 MGYSIFYIVLFVSIFCVGISLASSIEDQKRDKIRQLPGQPKNVGFEQYSGYVTVNEQSGRALFYWLIEAPLNRGPNSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLFLNRYAWNNLANILFLDSPAGVGFSYCNKTTDLYTFGDQKTAEDAYIFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYQRNKGINNPTINFKGIMVGNGVTDDYHDYVGTFEYWWTHGLISDSTYRILRIACDFGSSLHPSVQCFQALRVAVAEQGNIDPYSIYTPPCNNTASLRSGLNGRYPWMSRAYDPCTERHSDVYFNRPEVQKALHANVTGIPYIWKTCSDIVGNYWTDSPLSMLPIYHELINAGLRIWVFSGDTDSVVPLTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTLVTIRGAGHEVPLHKPREAFILFRSFLENKDMPSSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3508 459 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 457 IPR001563 GO:0004185|GO:0006508
Mtr1g3508 459 PANTHER CARBOXYPEPTIDASE 16 457 - -
Mtr1g3508 459 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Mtr1g3508 459 Gene3D - 358 451 - -
Mtr1g3508 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Mtr1g3508 459 SUPERFAMILY alpha/beta-Hydrolases 29 456 IPR029058 -
Mtr1g3508 459 Gene3D - 311 347 - -
Mtr1g3508 459 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3508 Mtr-Chr1 46634580 46638311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3508 321 455 Calmodulin-binding Proteins AT2G22960 30.147 5.86e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3508 K16297 - gmx:100805722 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3508 1 46634580 46638311 Mtr1g3508 1 46634580 46638311 ECH