Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3483 ATGGATATCACAATCACATCAAGAGAAACAATCAAACCATCATTTCCAACACCAAATGAACACAAATTCTTCAAACTCTGTCTATTTGATCAGCTTCAATTAGCAACCTATTTACCAATGGTTATGTTTTATCCCAAAAAACAAGGCCTAACAGAAATCTCCCATTTCATTGCTCAATTAAAAAATTCACTTTCAGAAACATTAACCATTTTCTACCCTGTTGCAGGCAGAAGAAATGATCACACCTTTATCACTTGCAATGATGAAGGTGCTATTTACTTGGAAGCCAAGGTAAATCAAACCATGGTTGAATTTCTCACACCACCTAAGCTAGAGTTTCTTAATAAATTGCTTCCATGTGAGCCTAATAAGATGCACTCAAATGAAGAAAAAGATTTACCACAAGTACTTGTACAAGTTAATATATTCAATTGTGGTGGAATAGCTATAGGTACTTGCAATCTCCATACCCTCCTCGACGGTTGTTCCGGCAGTCTCTTCCAAACTATTTGGGCTGCCATTTGTCGCGGCACCTCTAAAGATGAATTACCATGCCCCGACTTCTTTTCTGCTTCTTCTTTCTTTCCACCAATAAATCATGTTGGTAAGAATACTAATGAGGACATAGACGTACAAAAAAAATGTAGCACAAGAAGATTCGTGTTCGGCTCTGAATCCATCGAAACTTTAAGAGCTAAAGCAAAAGACGACGATGATAATGATAATGTTTATGAAAATTATAAGTTTCCTACAAGATATGAAGCATTGGCTGCTTTCATTTGGAAACACATGACACTTGCATGCAAAATGGAGGGAGGTGTAGATAGCAATAAGCCAACATTGGTTATGCATATTTTGGACATGAGGAGAAGGATGGGTGAGCCTTTTTCAAAATACACAATAGGCAACATTTTATGGCCAGTGATGGTGTTTTGTGAAAGTGTTACTTTACAAACTGATATTAAATATTTGGTTAGAATTTGTAAGGAGAAATTTGGGAAGATTTCAAAGGAATTGTTTTTAAGAGTGAAGAGTGATCCAAGCATGTTAGGAAGCAATGAATGTGTGGATTTGCCACAAGGTATTGAAACAATAAGTCTAATTCCAATTGTTTTGACTAGTTGGTGTGGTTTGAATTTTAGTGAACTTGATTTTGGTTGGGGCAAGCCTTTTTGGGTTGGTGTTAGAGGAGGAGATCAAGAAACTCTTCCAAATGTAGCTGTTATTATGGAAACAGATGAAGGTATGGAAGCTTGGGTGACAATGGAAATGCATAATATAGCTTACTTGGAAAATGATAGGGAGTTTCTCAAATTTGCTTTGCCTAATCCTTGTGTTACAAACATTTAG 1350 0.3637 MDITITSRETIKPSFPTPNEHKFFKLCLFDQLQLATYLPMVMFYPKKQGLTEISHFIAQLKNSLSETLTIFYPVAGRRNDHTFITCNDEGAIYLEAKVNQTMVEFLTPPKLEFLNKLLPCEPNKMHSNEEKDLPQVLVQVNIFNCGGIAIGTCNLHTLLDGCSGSLFQTIWAAICRGTSKDELPCPDFFSASSFFPPINHVGKNTNEDIDVQKKCSTRRFVFGSESIETLRAKAKDDDDNDNVYENYKFPTRYEALAAFIWKHMTLACKMEGGVDSNKPTLVMHILDMRRRMGEPFSKYTIGNILWPVMVFCESVTLQTDIKYLVRICKEKFGKISKELFLRVKSDPSMLGSNECVDLPQGIETISLIPIVLTSWCGLNFSELDFGWGKPFWVGVRGGDQETLPNVAVIMETDEGMEAWVTMEMHNIAYLENDREFLKFALPNPCVTNI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3483 449 Gene3D - 1 204 IPR023213 -
Mtr1g3483 449 Coils Coil 448 449 - -
Mtr1g3483 449 Pfam Transferase family 1 436 - -
Mtr1g3483 449 PANTHER F21J9.9 4 444 - -
Mtr1g3483 449 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 444 - -
Mtr1g3483 449 Gene3D - 205 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3483 Mtr-Chr1 46273332 46274681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3483 37 431 Monolignol Biosynthesis Gene Families AT5G48930 23.430 4.03e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3483 - K13065 gmx:102668997 682.945