Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3478 ATGAAGTTTCTTGTAAAAAAAACAAGAAATACCCATTTAAATGAGTCAGAAACTACTGTTAGTTCGATGTGCAAATCGAAAAAGAGCACCACCGTGGTGCAACCCACAACCAGAAACAACCCTCACCCACAACGGACCTCAACAACATCTTCATCCTCAAATCTCCCATCATCTTCAACCAGCGAAGTTCCAATCACAGAATCAAGAAGTTACATATACAACAACTCAAAGCAAAAACAATGGTCCAAAACCTCTTCATCATCTTCTTCCATTTCAACTCACTCTTCTCTCTCAAGCCTCAAACATGCTCTCCCTGAAAACCCTCACATCTACCCTTTCTCCGATATCTCATCCGCCACCAATAACTTCTCTGCCAACCGTCTCTCCTCCAACTCCTTCCGCTGTTCTCTTCACAACCGCGACGTCGTTGTTTTTCAACGGAAATTCCGTCGCCAAATTCACCTCCCTGAGCTTCGTGATCGACTTGCTCTTATCTGCCGGAGTCACCATAGTAGTCTCGTCAAACTTCTCGGAGCTTCTGTCTCCGGGAGCTACATTTATCTTGTTTATGACTTTGTTCCCGGTGCTAATCTTTCTGATTGTCTTCGTAATCGTCGGAATCCTAGCTTCACCGATCTTAATACGTGGACTTCGAGGATGCTGATTGCTTCCGATCTTGCTCACGGTCTTGATTACGTTCATAATTTTGCTGGTTCTGGTTCTGGTTTTGTTCATAATCATATCAAAAGCTCTAGCATCATCGTTGCGGAGGAGAATTTTGGTGTGAAGATTTGTCACTTCGGTACGTCGGAGCTTTGTGGCGAGTCTGTCGATGATACTGCCGGATCGGACTCCGGGAGGAAGTTGAAGAAGTCCGGTAGCAAGGGAGTGAGATTTGAGGGAACGAGAGGGTATATGGCGCCGGAGTTTCTTGTTACTGGCGTGGCGACGCAGAAGACGGATGTTTACGCATTTGGCGTGGTGGTTTTGGAGATTCTGAGCGGGGAAGAAGCGGTGAGATTTGAATTGGAGGGAAACGAAGGCGGGTATAAGAGGGTGAGTGTAGTGGAGACGGCGAAGGAAGCGTGGAAGGAGCACGGTGGTGTAAGAAAATGGGTTGATCGGAGGTTGAAGGATTCGTTTCCGATGGATGTGGCTGAGAAAATGATTCGGGTCGGGTTGGAGTGTGTTGGGGATGATCCGAATGAGAGACCGGATATGGGTCGGGTTTCGATGGAAGTGTCCAAGTTGTATTTGGAGTCGAAAGAGTGGGAGGAGAAATTGGGAACTAACATTGATTTTTCGGTTTCGTTGGCTCCTCGGTGA 1326 0.4698 MKFLVKKTRNTHLNESETTVSSMCKSKKSTTVVQPTTRNNPHPQRTSTTSSSSNLPSSSTSEVPITESRSYIYNNSKQKQWSKTSSSSSSISTHSSLSSLKHALPENPHIYPFSDISSATNNFSANRLSSNSFRCSLHNRDVVVFQRKFRRQIHLPELRDRLALICRSHHSSLVKLLGASVSGSYIYLVYDFVPGANLSDCLRNRRNPSFTDLNTWTSRMLIASDLAHGLDYVHNFAGSGSGFVHNHIKSSSIIVAEENFGVKICHFGTSELCGESVDDTAGSDSGRKLKKSGSKGVRFEGTRGYMAPEFLVTGVATQKTDVYAFGVVVLEILSGEEAVRFELEGNEGGYKRVSVVETAKEAWKEHGGVRKWVDRRLKDSFPMDVAEKMIRVGLECVGDDPNERPDMGRVSMEVSKLYLESKEWEEKLGTNIDFSVSLAPR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3478 441 SUPERFAMILY Protein kinase-like (PK-like) 151 414 IPR011009 -
Mtr1g3478 441 ProSiteProfiles Protein kinase domain profile. 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3478 441 Gene3D Phosphorylase Kinase; domain 1 79 192 - -
Mtr1g3478 441 Gene3D Transferase(Phosphotransferase) domain 1 194 435 - -
Mtr1g3478 441 MobiDBLite consensus disorder prediction 1 66 - -
Mtr1g3478 441 Pfam Protein tyrosine and serine/threonine kinase 151 411 IPR001245 GO:0004672|GO:0006468
Mtr1g3478 441 PANTHER OS09G0572100 PROTEIN 23 441 - -
Mtr1g3478 441 PANTHER OS09G0572100 PROTEIN 23 441 - -
Mtr1g3478 441 MobiDBLite consensus disorder prediction 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3478 Mtr-Chr1 46228371 46229945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3478 73 431 Receptor kinase-like Gene Family AT1G51940 29.679 2.87e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr1g3478 PK_Tyr_Ser-Thr 9.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3478 - - mtr:MTR_1g094730 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3478 1 46228371 46229945 Mtr1g3478 1 46228371 46229945 ECH