Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3472 ATGAATAACTCAGTAGCTTCAGAGAACAGTTTTATTATTGAAAGTGATGAAGAAGATGATAAGGATTTTAACAAAGGTGATGATGGAAATGATTCTGATTCTTCCAATTACTCAAATGAAAATCCACCACAGAGGAAACAAAGTTCTTATAATCCATCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAGTATTGGATTTCTGGGAAATTCTTCGCTTACAAGATTAAGCAGTTCCTTCCTTTCTACATCTCTAACAAGGAGGCACACTCCTGAAGTACTTCCTTCAGTCACAAAACCTTTGATACAACCAACAGAAGAGGAGAAGCACCAAAGACGCAGCTCTCACACCTTGCTTCCTCCCCTTTCTAGAAGGTCTTCTTTGCTTAAGAAAGAATCCAAGGTTTCTCATGAAGTTCCTTCTCGCCACTGCTCTTTCGGACAGGCTGTGCTTAATGGCATAAATGTCCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGCTAGGACTTTCCATCTTGTTCATTTTTGGAATTCTTTCTTTTTATACTGGATTGCTCTTGCGTTCCTGCTTGGACAGTGAACCTGGTCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTGCCGGACGAATTGCTATTTCAATAGTATTATACGTCGAATTATATGGCTGTTGTATTGAATATATAATTTTGGAGGGAGACAACTTGGCTTCCTTGTTTCCAAATGCATACTTAAATTTAGGTGGAATTGAATTGAATCCACAAACATTGTTTGCTGTGGTTGCAGCCTTGGCTGTTCTTCCTACAGTTTGGCTCCGCGACTTAAGCGTTCTTAGTTACATCTCAGCTGGTGGAGTTATTGCATCAGTTTTAGTGGTTCTGTGCTTGTTATGGATTGGCATAGAAGACGTCGGCTTTCAACGCTCAGGGACAACACTCAATCTTGGAACTCTTCCTGTTGCTATTGGTCTTTATGGTTACTGTTATTCTGGACATGCCGTGTTCCCAAATATTTATACATCAATGGCAAAACCAAACCAATTCCCTGCAGTACTTGTAGCATGTTTCGGAGTTTGTACCTTACTATATGCTGGTGGTGCTGTTATGGGATACAAAATGTTTGGAGAAGATACACTCTCTCAATTCACCCTTAACCTGCCTCAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTTGAAGAGTTGATACCAGCAAACCATGCCAAGTCTTACCTATTTTCCATTTTCATCAGAACAGGCCTTGTATTTTCTACCCTTGTTATTGGTCTCTCAGTTCCCTTTTTTGGTTTGGTGATGTCCTTGATTGGATCATTACTTACAATGCTTGTAACTTTGATATTGCCATGTGTTTGTTACCTAAGAATCTTGCGGGGAAAAGTAACGCGAATACAGGCAGGACTTTGCATTACAATCATTGTAGTAGGCGTTGCGTGTTCTTCCGTTGGAACGTACTCAGCCCTTGCGGAGATTGTTAAGAGTTTGAGTGGATGA 1626 0.409 MNNSVASENSFIIESDEEDDKDFNKGDDGNDSDSSNYSNENPPQRKQSSYNPSWPQSYRQSIDLYSSVPSPSIGFLGNSSLTRLSSSFLSTSLTRRHTPEVLPSVTKPLIQPTEEEKHQRRSSHTLLPPLSRRSSLLKKESKVSHEVPSRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILFIFGILSFYTGLLLRSCLDSEPGLETYPDIGQAAFGTAGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLGGIELNPQTLFAVVAALAVLPTVWLRDLSVLSYISAGGVIASVLVVLCLLWIGIEDVGFQRSGTTLNLGTLPVAIGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLVACFGVCTLLYAGGAVMGYKMFGEDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPANHAKSYLFSIFIRTGLVFSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCYLRILRGKVTRIQAGLCITIIVVGVACSSVGTYSALAEIVKSLSG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3472 541 PANTHER OS05G0424000 PROTEIN-RELATED 25 538 - -
Mtr1g3472 541 MobiDBLite consensus disorder prediction 1 55 - -
Mtr1g3472 541 Pfam Transmembrane amino acid transporter protein 152 530 IPR013057 -
Mtr1g3472 541 PANTHER AMINO ACID TRANSPORTER AVT1B 25 538 - -
Mtr1g3472 541 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3472 Mtr-Chr1 46169022 46173702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3472 3 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.199 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3472 K15015 - gmx:100775840 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3472 1 46169022 46173702 Mtr1g3472 1 46169022 46173702 ECH