Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3400 ATGACTTCCTCTCTCTTTTCATCCTCTGCCTCTCTTTCTACTTACTACCATCTCATCTTCACAGTCTTGGCCTTTCTCTTATCAGCCCTTATTTTCTTCCTCACACAAAAAACCAAATCCAAACACCATAACCTTCCACCAGGTCCACAAGGATGGCCTGTTGTTGGCAACCTTTTCCAAGTTGCGCGTTCCGGCAAACAATTCCAAGATTATGTGAAAGATATGAAAGCAAAATATGGCTCAATCTTCACACTCAAGATGGGAACAAGGACAATGATCATCATCACAGATGCAAAACTTGTGCATGAAGCTTTCATTCAAAAGGGTGCTCTCTATGCATCTAGACCACCTGAGAATCCAACAAGGAACATATTCAGTGCAAACAAGTTCACTGTGAATGCTGCAGTTTATGGTCCTGTTTGGAAATCACTAAGAAGAAACATGGTTCAGAACATGCTGAGTTCAACTAGACTCAAGGAGTTTAAAAGTGTTAGAGACAAAGCAATGGATAAACTCATCAATAGGCTTAAAGTTAATGCTGAGAATAACAATGGCGTTGTTATTGTTGTCAGAGATGCAAGGTTTGCTGTTTTTTGCATACTTGTTGTTATGTGTTTTGGTTTAGAAATGGATGAAGAAAAACTTGAGAGAATAGATCAAGTTATGAAGAATGTCCTAATCACTTTAGATCCAAGAATTGATGACTTTTTACCAATCCTAAGCGTGTTTTTCTCTAAACAAAGAAAGAGAGCTTTGGAAGTTCGCAAAGAACAAGTCGAATTCCTAGTTCCTTTCATTGAACAAAGAAGGAGAGCATTTCAAAACCCTGGTTCAGATCAAACAGCTACAACATTTTCATACTTAGACACACTTTTTGATATCAAAGTTCATGAAGGTAAGAAATCAACACCTTCTAATGAAGAATTGGTTTCACTTATCTCAGAGTTTCTGAATGGAGGAACAGATACAACAGCTACTGCTGTTGAATGGGGAATTGCACAACTCATTGACAACCCTGAAATTCAAGCAAAACTTTATCAAGAAATTAATAGTATAGTTGGAGATAAGAAAGTAGAAGAAAAAGATGTTGAGAAAATGCCTTATTTACAAGCTGTGGTGAAAGAGTTATTAAGGAAGCATCCACCAACACATTTTGTACTAACACATGCTGTTACTGAACCTACCACATTAGGAGGTTATGATATACCAATTGATGCAAATGTTGAGGTATATACAGCTGGCATAGGTGAGGACCCTAAATTATGGTCCAACCCTGAAAAGTTTGATCCTGAAAGGTTTCTTTCTAAGGGTGAGGAAGCTGATATAACTGGTGTTACAGGAGTAAAAATGATGCCATTTGGTGTTGGGAGAAGGATTTGTCCTGGTTTGGCTATTGGTACTGTGCATATTCATTTGATGTTGGCTAGGATGGTTCAAGAGTTTGAATGGAGTGCTTATCCACCAGGGAAGAAGATAGATTTCTCTGGAAAGATGGAGTTTACTGTTGTGATGAAGGAGTCTTTAAGAGCAAAAATCAAGCCAAGAGGAGAAACTTTGAAGTAG 1563 0.38 MTSSLFSSSASLSTYYHLIFTVLAFLLSALIFFLTQKTKSKHHNLPPGPQGWPVVGNLFQVARSGKQFQDYVKDMKAKYGSIFTLKMGTRTMIIITDAKLVHEAFIQKGALYASRPPENPTRNIFSANKFTVNAAVYGPVWKSLRRNMVQNMLSSTRLKEFKSVRDKAMDKLINRLKVNAENNNGVVIVVRDARFAVFCILVVMCFGLEMDEEKLERIDQVMKNVLITLDPRIDDFLPILSVFFSKQRKRALEVRKEQVEFLVPFIEQRRRAFQNPGSDQTATTFSYLDTLFDIKVHEGKKSTPSNEELVSLISEFLNGGTDTTATAVEWGIAQLIDNPEIQAKLYQEINSIVGDKKVEEKDVEKMPYLQAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTAGIGEDPKLWSNPEKFDPERFLSKGEEADITGVTGVKMMPFGVGRRICPGLAIGTVHIHLMLARMVQEFEWSAYPPGKKIDFSGKMEFTVVMKESLRAKIKPRGETLK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3400 520 SUPERFAMILY Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 Gene3D Cytochrome P450 37 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Mtr1g3400 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 515 - -
Mtr1g3400 520 PANTHER CYTOCHROME P450 77A4 8 515 - -
Mtr1g3400 520 Pfam Cytochrome P450 46 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3400 520 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3400 Mtr-Chr1 45256397 45258301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3400 36 515 Cytochrome P450 AT3G10570 70.625 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3400 K21995 - gmx:100795510 846.269