Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3388 ATGGACTTGCCGAAACACCACCGTCCCACACCAACAACCTCTCTAAGAGACACATCCGACTCCTCCACGGGTAGCTGGGATGCCCTCGAATGGACCAAAATTGAGCCAATTTCGCGTTTTGTCTCTCCCGCGAATCTTGATTTTTTGCTCGACGATGAACAAGTTGTGGCCGAAGGACACGGTGTTGTTCTTGTCAATACAGATGATGCAGGCGTGTTGATTGTAACAAACTTTCGTGTAATATTTTTGAGTGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACCATTGAGAAGTTTAACAAGACAGCTGTAAAAGCTCAGTCAAATACTCATCAATTAGACAAGACACCAACACAAAGACTGCTGCAGGTGATTGGGAAAGATATGAGAATTATAGTCTTTGGTTTTAGGCCTCGTACAAAGCAGAGACGTGCAATATATGATGCACTAGTGAAGTGTACAAAGCCAACAATATTATGGGATCTTTATGCTTATTCGTCTGGGCCTTCCACTTTTAAGAACACCTCTCCAATGGTGCGATTATTGGATGAGTATTTTCGACTCATTGGCAAAGCTTCTCATCATGCTTCAATGGACATGATTGAAAGTGGCTCCTTCACCCTGTCAAATGACTTGTGGAGAATTAGTGGTGTGAATTCCAGTTATACAATGTGCCATAGTTATCCATTTGCTTTGGTTGTTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTAGCAAATTCCGTGCAAGATGCCGTCTGCCTGTAATTTCTTGGTGTCATCCTGTTACTGGCGCTGTCCTTGCACGTTCTTCACAACCTTTAGTTGGTCTCATGATGAATATGAGGAGCAACATGGACGAAAAACTTGTGGCCGCACTTTGCGGCAACCTTGACGATGGCTCAAAGAGAAAGCTATATATCGCTGATGCGAGACCAAGGAAAAATGCATTAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTTGGGATAGACAACATTCATGCAATGAGAGAGAGCTTTGTTCGTCTCCGAGAATTCATAGACACTCATGGCAGAACATCATCGGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCGATATGGGGTGGCGGCAATTTAAGCAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGTTATTGCATGTTCAGAATGTTTTAGCTGGTGCAGCTTGGATTGCTGCTCGTGTTGCTATGGAAAAGGCTTCTGTTCTTGTTCATTGCAGTGATGGATGGGATAGGACAAGCCAGTTAGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCAGAGGTTTTCAGGCACTTGTCGAAAAAGACTGGCTGGCATTTGGTCATCCGTTTTCTGATCGTGTGGGAACACCGTCTATCTCTGGAAGTGGGAACGTGTCTTTCGAGTTATCCAGGCAGTCTTCAACTGGCATCCCATCATCACCAATGCGTCAGCCATCAGGGACATTACCTCCAGCTCCATCTCATGCGCATAGTTCAGGCAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTGTCACAACTACTGCGGATGTATCCTTTTGCATTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTTTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAAAAGGAGAGGCTGCAGTGCAATGTGTTTGAAAGTTGTGGATGTTTGTGGGCATACTTGGCTGATAGGCGGGCATCAGAAGGAGGTTTACATGTGCATTGTAATCCCTTTTATGATCCACTGAAGTACAGCGGTCCTCTTCTGCCCCCAGCAGCAGCGTTAGCCCCGACTATATGGCCCCAATTTCACCTTCGTTGGGCCTGCCCAGAAGAAGCACATAGTGGGGAGATTGAAGCACAATGTAGGAAGATAATACTAAAAAACTCGGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCTAGAGAAAATACAAATGCTGTGCAATCATTGCATGCTGAATTGCGACGAGAGAAACTGTTGAATATCTCAGCTATGAACACGGCAAAGAGGATAACCAAAGAAAATACGGACATAAAGCGTGCAATTCAGTCAATTGGGTGCAAGATTCACATTTCTAGTAGTGGTGATTGCATTGTTGACATTGAAAACAACCCAGCGGGAGCACATCCAAACTTGTATTGTTCCTCTAGGCAAGGATCAAGTAGTGCTGTGATTAACGACAAAAAGGATCTATATGTGTCTGTAACAGAAGATGACGGTGATGATGGAAACGATGTTATTGGTCGAATATGTGACTCTCTATGCCCGTTTCGTACTAAAGATGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACTAGGTAGCCAGTTTGTTGGTTTGAAAGCGAATTTTGATGCATTTGACCAACTTTCAATTGATGACAGTTATTTCAAGCCCAAGTAA 2532 0.4392 MDLPKHHRPTPTTSLRDTSDSSTGSWDALEWTKIEPISRFVSPANLDFLLDDEQVVAEGHGVVLVNTDDAGVLIVTNFRVIFLSEGTRKVIALGTIPLATIEKFNKTAVKAQSNTHQLDKTPTQRLLQVIGKDMRIIVFGFRPRTKQRRAIYDALVKCTKPTILWDLYAYSSGPSTFKNTSPMVRLLDEYFRLIGKASHHASMDMIESGSFTLSNDLWRISGVNSSYTMCHSYPFALVVPKSISDDEVLQASKFRARCRLPVISWCHPVTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCGNLDDGSKRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESFVRLREFIDTHGRTSSDGMSSFLRHGGSIWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFRGFQALVEKDWLAFGHPFSDRVGTPSISGSGNVSFELSRQSSTGIPSSPMRQPSGTLPPAPSHAHSSGNYSPIFLQWADCVSQLLRMYPFAFEFSAAFLVDFLDCMLSSRFGNFFFNSEKERLQCNVFESCGCLWAYLADRRASEGGLHVHCNPFYDPLKYSGPLLPPAAALAPTIWPQFHLRWACPEEAHSGEIEAQCRKIILKNSEMQKAKEVAERKARENTNAVQSLHAELRREKLLNISAMNTAKRITKENTDIKRAIQSIGCKIHISSSGDCIVDIENNPAGAHPNLYCSSRQGSSSAVINDKKDLYVSVTEDDGDDGNDVIGRICDSLCPFRTKDGGCRWPNGGCAQLGSQFVGLKANFDAFDQLSIDDSYFKPK* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3388 843 MobiDBLite consensus disorder prediction 498 526 - -
Mtr1g3388 843 SMART gram2001c 38 108 IPR004182 -
Mtr1g3388 843 Pfam Myotubularin-like phosphatase domain 169 584 IPR010569 -
Mtr1g3388 843 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 211 647 IPR029021 -
Mtr1g3388 843 SUPERFAMILY PH domain-like 49 171 - -
Mtr1g3388 843 MobiDBLite consensus disorder prediction 1 24 - -
Mtr1g3388 843 PANTHER MYOTUBULARIN-RELATED 17 842 IPR030564 -
Mtr1g3388 843 CDD PTP-MTM-like 258 545 - -
Mtr1g3388 843 MobiDBLite consensus disorder prediction 498 513 - -
Mtr1g3388 843 ProSitePatterns Tyrosine specific protein phosphatases active site. 435 445 IPR016130 GO:0016311|GO:0016791
Mtr1g3388 843 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 17 842 - -
Mtr1g3388 843 Gene3D - 60 159 IPR011993 -
Mtr1g3388 843 ProSiteProfiles Myotubularin phosphatase domain. 195 643 IPR010569 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3388 14 843 Protein tyrosine phosphatase (PTP) family AT3G10550 66.746 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3388 K18081 - gmx:100781842 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3388 1 45114359 45130956 Mtr1g3388 1 45114359 45130956 ECH