LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g3377	ATGGATTATATGACTAGTGCAATGCTCTTTTTGGTGACATGCATTGTCACCATCTTCATTGATTCATTGCATGCAAGCAGAAAATCAAACTACAAGCTTCCACCTGGACCTTCCTTTTTCACTATCATGTCAAATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAGAATTTGCTAAGTTATATGGTCCTATTATGCGCATTAAGCTATGCACAGAAACTACCATAATCATCTCATCATCACATATGGCCAAAGAGATTCTTTTTACAAATGATTCATTGTTCACTGATAGATCTGTTCCTGATAACACAACAACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTTTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGCATGAAATTAAAAGATCTTCTAAATGATATGCATAAAAGCAGCATAACTGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCTACTCTATTAAGTGCTGTTGGAACACCAAATATTGCTGATCATTTCCCAGTGTTGAAGATTTTTGATCCACAAGGCATTAGAAGACACACTACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGACCAACGAATGAAAATGAGACAAAGTGAACAGTATATCTCCAAAAATGACATGCTAGACGCCTTGTTGGACATTTCCAAGGAAGATAACCAAAAGATGGATAAAAGACAGATTAAGCATCTACTACTTGATTTGCTTGTGGCGGGAACGGAAACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGGCATCCAGAGGTTATGTCAAAAGCAAAGAAGGAATTAGAGGAAACCATTGGATTAGGCAAACCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTACTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTCATTTGTTTTCACCAGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGCAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTACATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATAATATGGAACCAAAGGACATGAACTTGGACAAACAACTAAGAGCTATTCCAGTTGCCCTAAACAATATGAAGTATTGA	1470	0.3667	MDYMTSAMLFLVTCIVTIFIDSLHASRKSNYKLPPGPSFFTIMSNVVELYNKPQQTLAEFAKLYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSITGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDQRMKMRQSEQYISKNDMLDALLDISKEDNQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKPIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEPKDMNLDKQLRAIPVALNNMKY*	490

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g3377	489	Gene3D	Cytochrome P450	18	481	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	Pfam	Cytochrome P450	34	472	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	PRINTS	P450 superfamily signature	299	316	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	PRINTS	P450 superfamily signature	352	363	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	PRINTS	P450 superfamily signature	428	437	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	PRINTS	P450 superfamily signature	437	448	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g3377	489	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	1	485	-	-
	Mtr1g3377	489	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	1	485	-	-
	Mtr1g3377	489	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	430	439	IPR017972	GO:0005506\|GO:0016705
	Mtr1g3377	489	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g3377	Mtr-Chr1	44963867	44966030	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g3377	1	482	Cytochrome P450	AT2G45550	38.812	4.24e-129	383

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g3377	-		-	gmx:100800810	672.93

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