Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3377 ATGGATTATATGACTAGTGCAATGCTCTTTTTGGTGACATGCATTGTCACCATCTTCATTGATTCATTGCATGCAAGCAGAAAATCAAACTACAAGCTTCCACCTGGACCTTCCTTTTTCACTATCATGTCAAATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAGAATTTGCTAAGTTATATGGTCCTATTATGCGCATTAAGCTATGCACAGAAACTACCATAATCATCTCATCATCACATATGGCCAAAGAGATTCTTTTTACAAATGATTCATTGTTCACTGATAGATCTGTTCCTGATAACACAACAACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTTTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGCATGAAATTAAAAGATCTTCTAAATGATATGCATAAAAGCAGCATAACTGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCTACTCTATTAAGTGCTGTTGGAACACCAAATATTGCTGATCATTTCCCAGTGTTGAAGATTTTTGATCCACAAGGCATTAGAAGACACACTACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGACCAACGAATGAAAATGAGACAAAGTGAACAGTATATCTCCAAAAATGACATGCTAGACGCCTTGTTGGACATTTCCAAGGAAGATAACCAAAAGATGGATAAAAGACAGATTAAGCATCTACTACTTGATTTGCTTGTGGCGGGAACGGAAACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGGCATCCAGAGGTTATGTCAAAAGCAAAGAAGGAATTAGAGGAAACCATTGGATTAGGCAAACCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTACTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTCATTTGTTTTCACCAGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGCAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTACATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATAATATGGAACCAAAGGACATGAACTTGGACAAACAACTAAGAGCTATTCCAGTTGCCCTAAACAATATGAAGTATTGA 1470 0.3667 MDYMTSAMLFLVTCIVTIFIDSLHASRKSNYKLPPGPSFFTIMSNVVELYNKPQQTLAEFAKLYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSITGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDQRMKMRQSEQYISKNDMLDALLDISKEDNQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKPIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEPKDMNLDKQLRAIPVALNNMKY* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3377 489 Gene3D Cytochrome P450 18 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 Pfam Cytochrome P450 34 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 485 - -
Mtr1g3377 489 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 485 - -
Mtr1g3377 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Mtr1g3377 489 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3377 489 SUPERFAMILY Cytochrome P450 34 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3377 Mtr-Chr1 44963867 44966030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3377 1 482 Cytochrome P450 AT2G45550 38.812 4.24e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3377 - - gmx:100800810 672.93