Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3376 ATGGATTCTGCTACTAGTGCACTTCTCTTTTTGCTGACATGCATTGTCACGTACTTTTTTGGTTCACTACATGCAAAAATCAGAAAATCAAATTGCATGCTTCCACCAGGGCCTTCCTTTTTCATTATCATGTCACATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAAAATTTGCTAGGTTTTATGGTCCTGTTATGAGTATTAAATTATGGACAGAAACTACAATAATAATCTCTTCATCAGATATGGCCAAAGAGATTCTTCATACTCATGATTCATTGTTCATTGATAGATCTGTTCCTGATAACACAACAACTCATAATCACAACAATTTTAGCTTAGTCTTCCTCCCATTTTCACCTCTCTGGCAACACCTTAGAAAAATATGCCATAACCATTTATTCTCCAACAAGACTCTTGATGCAAGTCAAGAACTTAGACGTATGAAATTAAAAGACTTTCTCAATGATATGCATAAAAGCAGCTTAACCGGTGAAGCTGTTGATATTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAATCTTTGGATGATGAATATAAAGATATATTGTCCACTATCTTGAAAGCTATTGGAACACCAAATTTGGCTGATCATTTCCCTGTTTTGAAAATTGTTGACCCACAAGGCATTAGAAGGCACACTTATAATTATGTTTCAAAGGTGTTTCATGCTTTAGATATTGTAATCGACCAACGAATTAAGCTAAGACAAAGTGAACATTATGTCTCTAACAATGATATGTTAGACACCTTGTTGGACATTTCCAAAGAAGATAGCCAAAAGATGGATAAAAAACAAATTAAACATCTATTACTTGATTTGCTTGTAGCGGGAACAGATACAACAGCATATGGATTAGAAAGGGCAATGAGCGAAGTAGTACGCCATCCAGAGGTTATGTCAAAAGCAAAGAAGGAATTAGAGGAAACCATTGGATTAGGCAAACCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTACTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCACATTTGTTTTCACCAGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGTAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTACATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATGATATGGAACCAAAGGACATGAACTTGGACATTCCCCTAAGAGCTATTCCAGTTGCACTATAA 1458 0.3649 MDSATSALLFLLTCIVTYFFGSLHAKIRKSNCMLPPGPSFFIIMSHVVELYNKPQQTLAKFARFYGPVMSIKLWTETTIIISSSDMAKEILHTHDSLFIDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNHLFSNKTLDASQELRRMKLKDFLNDMHKSSLTGEAVDIGRAAFKACINFLSYTFVSQDFVESLDDEYKDILSTILKAIGTPNLADHFPVLKIVDPQGIRRHTYNYVSKVFHALDIVIDQRIKLRQSEHYVSNNDMLDTLLDISKEDSQKMDKKQIKHLLLDLLVAGTDTTAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKPIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENDMEPKDMNLDIPLRAIPVAL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3376 485 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 485 - -
Mtr1g3376 485 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 Pfam Cytochrome P450 35 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Mtr1g3376 485 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 SUPERFAMILY Cytochrome P450 35 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g3376 485 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3376 Mtr-Chr1 44955002 44956645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3376 1 475 Cytochrome P450 AT2G45550 40.452 8.70e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3376 - - gmx:100800810 669.848