Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3368 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTAAAGATTCAAAGGAGTTCTTCCTCTTCCAATGGTGGTGGTGGTGGTGCTGGGAATGTTCAGAGATCCAAAAGCTTTGCTTTTAGAGCTCCTCAGGAGAATTATACAATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAGTTGTGTATGCAATGAAGATCATGGACAAAAAATTTATTACCAAAGAGAACAAAACTGCATATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGCATTGTGCGGCTATATTTCACATTTCAGGACACATTTTCTCTGTACATGGCACTTGAATCATGTGAAGGTGGAGAGCTTTTTGATCAAATTACCAGGAAAAGTCGTCTAACTCAGGACGAGGCACAATTTTATGCAGCTGAAGTTGTCGATGCTCTTGAATACATACACAGTTTGGGAGTGATACATCGTGACATTAAGCCAGAGAACTTGTTACTTACAACTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATTACCGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACATTTGTGGGAACTGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCCCCAGCAACCTTTGGAAATGATCTTTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATTGCAAGAGAAATTCGATTTCCTGATTACTTTTCAGACGAAGCAAGAGACCTTATTGACCGACTATTGGATTTAGACCCCAGCAGGAGACCAGGTGCAGGACCCGATGGTTATGCTATTTTGAAAAGCCACCCCTTTTTCAAGGGGGTTGACTGGAATAACTTAAGGGCACAAACTCCTCCGAAACTTGCTCTGGAACCTGGGGCAGGGGAGTCATCATGGAGTCCTGCTCACACTGGTGATGGTTCTGCAGCTTCTGCTAGACAGCCTGATGGTGCTACATCGTCTTCAGAGGGAGCTGGTTCCATAACCAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAATCTGTTCTTATGATCTCCATGGTGAAGAAATTACAAAAGATAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCGAAGCTGATCTATGTTGACCCTTCAAAATTAATTGTAAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACCAGTCCCTCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCATCTCAGTGGAAAAAAGCAATTGAAGGACTTCAAAACCGGTGA 1467 0.4179 MLEMEKDFDSKLKIQRSSSSSNGGGGGAGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYAMKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKSRLTQDEAQFYAAEVVDALEYIHSLGVIHRDIKPENLLLTTEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYAILKSHPFFKGVDWNNLRAQTPPKLALEPGAGESSWSPAHTGDGSAASARQPDGATSSSEGAGSITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKITSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSNFKICTPKKVMSFEDAKQRASQWKKAIEGLQNR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3368 488 ProSiteProfiles Protein kinase domain profile. 51 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3368 488 CDD STKc_PDK1 49 318 IPR039046 GO:0004674
Mtr1g3368 488 MobiDBLite consensus disorder prediction 1 30 - -
Mtr1g3368 488 SUPERFAMILY PH domain-like 312 487 - -
Mtr1g3368 488 MobiDBLite consensus disorder prediction 347 371 - -
Mtr1g3368 488 Gene3D Transferase(Phosphotransferase) domain 1 135 330 - -
Mtr1g3368 488 Coils Coil 468 488 - -
Mtr1g3368 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mtr1g3368 488 Pfam PH domain 385 487 IPR033931 -
Mtr1g3368 488 MobiDBLite consensus disorder prediction 14 29 - -
Mtr1g3368 488 Gene3D - 364 488 IPR011993 -
Mtr1g3368 488 SMART serkin_6 51 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3368 488 SUPERFAMILY Protein kinase-like (PK-like) 48 373 IPR011009 -
Mtr1g3368 488 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 25 484 - -
Mtr1g3368 488 Pfam Protein kinase domain 53 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3368 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 484 - -
Mtr1g3368 488 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
Mtr1g3368 488 MobiDBLite consensus disorder prediction 332 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3368 Mtr-Chr1 44847423 44854687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3368 1 488 AGC Kinase Gene Family AT3G10540 81.010 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Mtr1g3368 Pkinase 5.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3368 K06276 - gmx:100788780 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3368 1 44847423 44854687 Mtr1g3368 1 44847423 44854687 ECH