Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3361 ATGAACTGTCTTCAGAATCTTCCCAGATCCTCCTCAGTTTTACAATTCCACACACTTGTTTCTCCTCCTTCTACTGCTCGCCACCACAACATCTTTCTTCCTTCATCTTCTTCTTCTCTATCCCTGGGAATCAACACTAACTCTATTTACACTCCAACCATGCTACTTAAGGCTACTTCTGGTTCTATACCAAGTGCAGAGACAAGTAGCTCTGATGTTGAGGAGGAGGTGAAATCTGAGATATACAGTAATAACATGACAGAGGCCATGGGTGCTGTTTTGACTTATAGGCATGAATTAGGAATGAACTACAACTTCATCCGTCCGGACTTGATTGTTGGATCATGCCTGCAGACTCCTGAAGATGTTGATAAACTGCGTAAAATCGGAGTGAAAACTATATTTTGCTTGCAACAAAACTCAGATCTAGAATATTTTGGAGTTGATATTGATGCCATACGAGAATATGCCAACTCATGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTCGATTCATTTGATTTACGGAAGCGGCTTCCAGCTGTAATTAGCAAATTATATAAGGCAATTAATTCTAACGGAGGTGTGACATATATACATTGCACTGCTGGCCTTGGAAGAGCTCCAGCTGTTGCGTTGGCATATATGTTTTGGGTTCAGGGTTATAAACTCAATGAGGCTAATACACTACTTCTGAGCAAAAGGTCATGCTTTCCAAAGCTGGATGCCATAAAAAGTGCAACAGCCGATATTCTTACTGGCCTCAGTAAGAAGCCTGTCACGTTGTCGTGGGGACACCGCAATTGCTCTACGGTGGAAATTTCAGGACTTGATATTGGATGGGGGCAGAGAGTTCCCTTAAATTTCGATGACAAACAGGGTTCATGGTTTCTCAAGAAGGAAATGTTTGAAGGGCGCTATGAGTACAAGTACATTGTTGATGGAGAATGGACATGTAATAACGATGAGCTTGTAACCTCTCCCAATAAAGATGGCCATGTCAACAATTTTATCGAAGTCCTTGATGACGCGGACAGTGGCCGTGCCTCCCTTCGGGAGAGAGTGACTGGTGATGATCCTGATCTCACGAAGGATGAACGAAACAGAATAATAGAGTTTCTGGAAGCACTTCCCAATGAGGATCTCTGA 1158 0.4275 MNCLQNLPRSSSVLQFHTLVSPPSTARHHNIFLPSSSSSLSLGINTNSIYTPTMLLKATSGSIPSAETSSSDVEEEVKSEIYSNNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQNSDLEYFGVDIDAIREYANSCNDIQHLRAEIRDFDSFDLRKRLPAVISKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEANTLLLSKRSCFPKLDAIKSATADILTGLSKKPVTLSWGHRNCSTVEISGLDIGWGQRVPLNFDDKQGSWFLKKEMFEGRYEYKYIVDGEWTCNNDELVTSPNKDGHVNNFIEVLDDADSGRASLRERVTGDDPDLTKDERNRIIEFLEALPNEDL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3361 385 SUPERFAMILY E set domains 261 344 IPR014756 -
Mtr1g3361 385 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 100 245 IPR029021 -
Mtr1g3361 385 SMART dsp_5 103 253 IPR020422 GO:0006470|GO:0008138
Mtr1g3361 385 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 180 238 IPR000387 GO:0016311|GO:0016791
Mtr1g3361 385 CDD E_set_AMPKbeta_like_N 262 343 - -
Mtr1g3361 385 Gene3D Immunoglobulins 258 348 IPR013783 -
Mtr1g3361 385 CDD DSP_laforin-like 102 249 IPR045204 GO:0019203|GO:0046838
Mtr1g3361 385 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 383 - -
Mtr1g3361 385 Pfam Glycogen recognition site of AMP-activated protein kinase 262 346 IPR032640 -
Mtr1g3361 385 Pfam Dual specificity phosphatase, catalytic domain 146 241 IPR000340 GO:0008138|GO:0016311
Mtr1g3361 385 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 260 IPR020422 GO:0006470|GO:0008138
Mtr1g3361 385 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 383 IPR030079 GO:0005982|GO:0007623|GO:0019203
Mtr1g3361 385 Gene3D Protein tyrosine phosphatase superfamily 96 376 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3361 Mtr-Chr1 44763524 44770263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3361 102 378 Protein tyrosine phosphatase (PTP) family AT3G52180 68.953 2.66e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3361 - - mtr:MTR_1g090867 763.837