Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3346 ATGGCTTTCCCTATCCTCTTCCTTCTCCTCATTTCCCTTCCATTTTCTTTTTCTTCAGCTGAACTCAACATTGATTACTACAAACAAACATGTCCTGACTTTGAAAAAATTGTTAGGGAAAACATCTTCAACAAACAAAGTGCAAGCCCGGCAACAGCACCGGGACTCCTCCGTCTCTTTTTCCACGATTGCATCACCGACGGTTGTGATGGATCGGTCCTTATCTCTTCAACGGCTTACAACCCTCACGCTGAAAAAGACGCAGAAATCAACCTCTCCCTCTCAGGGGATGGATACGACGTCGTTAATAAAATAAAAAATGCATTGGAAATAGCATGTCCTGGTGTTGTTTCATGTTCTGACATTGTTGCACAAGCAACAAGGGATCTTGTTAAGATGGTTGGTGGTCCATTTTATCCTGTGGCGTTAGGAAGAAAAGATAGTCGTGTATCAGAAGCTTCAAGAACTGAAAAAGCTCTTCCAACAACAAAAATGACAATGGACGATATTATTAGCAAATTTACCGTAAAGAACTTCACTATTAAGGAAATGGTTGCATTAACCGGTGCACATACAATTGGTTTCACTCACTGCAAAGAATTCAGCGACAGAATTTTCAACTTCAGCAAAACCTCTGAGACTGATCCTACACTTCATCCAAAATTGGCTAAAGGGTTGAGAGAAGTTTGCAAAAACTATACTACTGACCCTAATATGGCTGCTTTTAATGATGTTAGGTCACCAGGGAAATTTGACAATGCATATTACCAAAATGTGTTGAAAGGTTTGGGTTTATTGAGAACAGATGCTATGTTGGGTTCTGATCCAAGGACCAAGCCAATTGTGGAGTTATATGCAAGAGATGAACAAGCTTTCTTTCAAGATTTTGCTAGGGCAATGGAGAAGGTTTCTGTGCTTGGAGTGAAGACTGGTACACAAGGAGAGGTGAGGAGCAGGTGTGACCAATTCAACAAAATTCAGGGCTAA 987 0.4083 MAFPILFLLLISLPFSFSSAELNIDYYKQTCPDFEKIVRENIFNKQSASPATAPGLLRLFFHDCITDGCDGSVLISSTAYNPHAEKDAEINLSLSGDGYDVVNKIKNALEIACPGVVSCSDIVAQATRDLVKMVGGPFYPVALGRKDSRVSEASRTEKALPTTKMTMDDIISKFTVKNFTIKEMVALTGAHTIGFTHCKEFSDRIFNFSKTSETDPTLHPKLAKGLREVCKNYTTDPNMAAFNDVRSPGKFDNAYYQNVLKGLGLLRTDAMLGSDPRTKPIVELYARDEQAFFQDFARAMEKVSVLGVKTGTQGEVRSRCDQFNKIQG* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3346 328 CDD secretory_peroxidase 21 323 IPR033905 GO:0004601|GO:0042744
Mtr1g3346 328 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PANTHER PEROXIDASE 41 3 327 - -
Mtr1g3346 328 PANTHER - 3 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Mtr1g3346 328 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Mtr1g3346 328 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 Gene3D - 25 324 - -
Mtr1g3346 328 SUPERFAMILY Heme-dependent peroxidases 22 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g3346 328 Gene3D Peroxidase, domain 2 161 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3346 Mtr-Chr1 44610587 44611573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3346 3 327 Peroxidase AT5G47000 54.601 1.30e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3346 K00430 - gmx:100795676 519.62