Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3319 ATGGGTATAGCAATGGGTGGTACTGATTCACTGAGCGTAAAAGCAGCTATGATGAGAGAGTCTCTTCAAAAAAGCCAAACAATTACAGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTTTCTGCTCTTGAAACCGCCATGCGTCCAACTCAGATTAGGACACATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCTGAGATTATATTGTCTCACTTTGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACACGAAGACCTGGAAAACTATCTTGAAGCAATTGCTAAGTTGAGAAGCAACATTCAATTTTTTGGCAGTAAGAGCAGTTTTAAGAATAGTGATGGTGTTGTCAGTCATGCCAGTAGTTTGTTAACTAAAGCTATTTCTAAGCTACAAGATGAATTTAATCAGCTATTATTATCGTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGATTGCCTTCCAAACTCGATGCGACCTTCTTCAGGATCACCTGGTAATGAGGGTGAACATAGTGGCAAGTCCAACCACCATTCTGACAACAATAACGCTGATGCTGTTGTATACACACCTCCCACTCTTATACCACCAAGAATTTTGCCACTTCTACATGATTTAGCTCGGCAAATGATTGAAGCTGGTCACCGACCACAGTTACTCACAATATACAGGGAAGCCCGTTCTAACGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTACAATGGGAGATTTTGGAAGCCAAAATCGGAAACTGGATTCATTTTATGCGAATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTTCTGAACAGTGTTTTGCCGAGGTGACTACAAACAGTGTTTCTATGCTACTAAGCTTTGGAGAAGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGAAACACTTTTTAAAGGCAAAGCTTGCACTGCAATAAGAGACGCGGCAATGGCTTTGACAAAAAAACTTGCACAAACAGCGCAGGAGACCTTTGGAGATTTTGAAGAAGCGGTTGAAAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTTCATCCTCTGACTAGCTATGTTATTAACTATGTCAAGTTTTTGTTTGACTACCGATCCACCTTGAAGCAACTCTTCCAAGAATTTGAAGGTGGAAATGATTCTTCCCAGCTAGCTACTGTAACTATGCGAATAATGCAAGCTTTGCAAATCAATCTAGATGGTAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCACTATATTGTCAGATCTGTTCGAAGGTCTGAAGCCAAGGATTTGCTTGGGGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAATGCTTATCTATTCAAGGACTTGCTTCATCAGGTGGTGGGAGTACTAATGCTGGTGGTGATGGTGGAACTGGAAGTAGCAGTGGTGCTTCAAGAGCACTAGTTAAAGAGAGGTTTAAGCAATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCACAATGGACAGTTCCGGACAGCGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTCGTGAAACGTTTTGGTCCTCTAGTGGAGACTGGAAAGAATCCTCAGAAGTACATCAAATACACAGCAGAAGATCTAGATCGAATGTTGGGCGAATTTTTTGAAGGAAAAAACATGAGTGAAACCAAGCGATAA 1950 0.4062 MGIAMGGTDSLSVKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEIILSHFDQYRQAEAKILKGPHEDLENYLEAIAKLRSNIQFFGSKSSFKNSDGVVSHASSLLTKAISKLQDEFNQLLLSYSKPVEPERLFDCLPNSMRPSSGSPGNEGEHSGKSNHHSDNNNADAVVYTPPTLIPPRILPLLHDLARQMIEAGHRPQLLTIYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTAIRDAAMALTKKLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLASSGGGSTNAGGDGGTGSSSGASRALVKERFKQFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVETGKNPQKYIKYTAEDLDRMLGEFFEGKNMSETKR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3319 649 SUPERFAMILY Cullin repeat-like 77 640 IPR016159 -
Mtr1g3319 649 MobiDBLite consensus disorder prediction 165 200 - -
Mtr1g3319 649 Gene3D Exocyst complex component Exo70 75 649 - -
Mtr1g3319 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 35 645 IPR004140 GO:0000145|GO:0006887
Mtr1g3319 649 Pfam Exo70 exocyst complex subunit 275 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr1g3319 649 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 35 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3319 Mtr-Chr1 44401377 44409927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3319 9 649 EXO70 exocyst subunit family AT5G03540 73.952 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3319 K07195 - gmx:100813987 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3319 1 44401377 44409927 Mtr1g3319 1 44401377 44409927 ECH