Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3316 ATGGGGTATCTATATGTGTTTCTTCTTTGCTTTTCTATATTGTTATATGTTACTTCTGCATTGAACTTTGAGGGTTTGGCTCTGTTGTCACTTTTGAGCCACTGGACTGTTGTGCCTGCTAACATAAGTTCCACATGGAATTCCTCTCATTCCACTCCATGTTCATGGAAAGGAGTGGAGTGTAGTGATGATTCCCTAAATGTAACATCTCTAAGCCTAAGTGATCATTCAATTTCAGGTCAATTAGGACCTGAAATTGGAAAGTTGATTCACCTTCAATTACTAGACTTGTCAATCAATGATCTCTCGGGTGAAATTCCTATAGAGTTAAGCAATTGTAATATGCTTCAGTACTTGGATCTTTCTGAAAACAATTTCAGTGGTGAAATTCCCTCAGAATTAAGCAATTGTAGCATGCTTCAGTACTTGTATCTTTCTGTAAACAGTTTCAGAGGTGAAATTCCTCAATCCTTGTTTCAAATTAATCCTTTGGAAGATTTGCGTCTCAATAACAATAGTTTAAATGGTTCAATTCCCGTTGGTATTGGAAACCTTGCTAACCTTTCTGTGATAAGTCTTGAGAGTAATCAGTTGTCAGGAACAATTCCCAAATCCATTGGAAATTGCAGTCAATTGAGTTACCTAATTTTGGACTCGAATCGATTGGAGGGAGTTCTACCGGAGAGTCTAAACAATCTAAAAGAACTTTATTATGTAAGTCTCAATCATAATAATCTTGGAGGGGCCATTCAATTAGGGTCGAGAAATTGCAAAAATTTAAATTATTTGAGTCTTTCATTCAATAATTTTACTGGTGGTATTCCATCAAGTTTAGGTAATTGTAGTGGTCTAACAGAGTTCTATGCTGCAATGAATAAATTAGATGGAAACATACCATCAACCTTTGGTTTGCTTCACAATCTTTCTATTCTGGAAATTCCAGAGAATCTTTTGTCTGGGAATATACCTCCACAGATTGGTAATTGCAAGTCATTGGAAATGTTACATTTGTATACCAATGAACTTGAGGGAGAAATTCCTAGTGAATTAGGAAAATTGAGTAAATTACGCGATCTTAGATTGTATGAAAACCTTCTGGTAGGGGAAATTCCACTTGGCATATGGAAAATTCGAAGCCTTGAACATGTTCTTGTGTATAATAATAGTCTCATGGGGGAGCTACCTGTGGAGATGACTGAGCTCAAAAATCTCAAGAACATTTCATTGTTTAACAACCAATTTTCTGGAGTTATACCTCAAACCTTAGGAATTAATAGCAGTTTGGTGCAGTTGGATTTCACGTCTAACAATTTTAATGGTACTCTCCCACCAAATCTTTGTTTTGGAAAGAAATTAGCGAAGCTGAATATGGGTGAAAATCAATTTATTGGAAGGATAACTTCGGATGTTGGAAGTTGTACAACTCTCACAAGGTTGAAACTTGAAGATAATTATTTTACTGGTCCTCTTCCTGATTTCGAAACGAATCCGAGTATCTCATACTTGAGCATTGGCAACAATAATATCAATGGAACAATTCCATCAAGTTTGAGTAACTGCACAAACCTCTCTCTTTTAGATTTGTCCATGAACAGCTTAACGGGTTTTGTACCCTTAGAGCTTGGAAACCTTCTGAATCTCCAGAGTTTGAAGCTTTCTTACAATAACTTAGAAGGTCCTTTGCCACATCAACTTTCAAAGTGTACCAAAATGAGTGTATTTGATGTGGGATTCAATTTCCTTAATGGTTCGTTTCCATCAAGTCTTCGGAGCTGGACAGCATTGACCAGTTTGACTCTCAGAGAGAATCGTTTTAGTGGGGGAATCCCGGATTTCTTGTCAGCATTTGAAAATCTCAACGAGTTAAAACTCGACGGAAATAATTTTGGAGGAAACATTCCTAAATCAATTGGACAATTGCAGAATTTGTTGTATGACTTAAATCTTAGTGCTAATGGACTAGTAGGTGAGCTTCCAAGGGAGATTGGAAACCTGAAGAGTTTGCTAAAAATGGATCTATCTTGGAACAATTTGACAGGAAGCATACAAGTTCTCGACGAGCTCGAATCATTATCCGAATTGAACATTTCATACAATTCTTTTGAAGGTCCTGTACCAGAACAACTGACGAAGTTATCAAATTCTTCTTCATCCTTTTTGGGCAATCCCGGCCTGTGTGTTAGCCTTTCATTACCCAGCAGCAATTTAAAACTATGCAATCACGATGGCACAAAATCAAAAGGCCACGGCAAAGTTGCAATTGTAATGATAGCACTTGGATCCTCAATACTTGTTGTGGTCTTGCTTGGACTAATTTATATATTTTTAGTTAGAAAGTCTAAGCAAGAAGCCGTTATCACTGAGGAAGATGGTTCTTCAGACCTTTTGAAGAAAGTGATGAAAGCTACAGCGAATCTAAATGATGAGTATATTATAGGAAGAGGAGCTGAAGGAGTTGTTTACAAAGCTGCAATAGGTCCAGACAATATTTTAGCAGTGAAGAAGCTTGTATTTGGTGAAAATGAACGAAAACGAGTAAGCATGTTAAGAGAAGTTGAAACACTTTCAAAGATTAGGCATAGAAATTTGGTCAGACTGGAAGGTGTTTGGCTAAGAGAAAATTATGGTCTAATCTCATACAGATTCATGCCAAATGGAAGCCTTTATGAAGTTTTGCATGAGAAGAATCCGCCGCAATCCTTAAAATGGAATGTCAGGAATAAGATAGCTGTTGGAATTGCTCAAGGATTGGTTTATCTTCATTATGACTGTGATCCTGTCATAGTTCACAGAGACATCAAAACAAGCAATATACTTTTAGATTCCGAAATGGAGCCTCATGTTGCTGACTTTGGTCTTTCTAAGATTTTGGATCAGTCTTCCAGTTCTTCCTCAACACAATCAGTAAATGTTTCTGGTACACTTGGTTACATTGCACCAGAGAATGCATATACAACAGTAATGGGAAAGGAGTCTGATGTATACAGTTATGGAGTAGTTTTGCTTGAGTTGATATCAAGAAAGAAGGCAATAAATCCATCATTTATGGAAGGAATGGATATAGTTACTTGGGTGAGATCTTTGTGGGAGGAAACAGGAGTTGTTGATGAAATTGTTGATTCAGAACTTGCCAATGAGATATCTAACTATGATTCTAATAAAGTGATGAAAGAAGTAACCAATGTGCTTTTGGTGGCTTTGAGATGTACAGAAAGGGATCCACGCCGGAGACCTACAATGAGAGATGTTATAAAACATTTGTTGTAG 3267 0.3698 MGYLYVFLLCFSILLYVTSALNFEGLALLSLLSHWTVVPANISSTWNSSHSTPCSWKGVECSDDSLNVTSLSLSDHSISGQLGPEIGKLIHLQLLDLSINDLSGEIPIELSNCNMLQYLDLSENNFSGEIPSELSNCSMLQYLYLSVNSFRGEIPQSLFQINPLEDLRLNNNSLNGSIPVGIGNLANLSVISLESNQLSGTIPKSIGNCSQLSYLILDSNRLEGVLPESLNNLKELYYVSLNHNNLGGAIQLGSRNCKNLNYLSLSFNNFTGGIPSSLGNCSGLTEFYAAMNKLDGNIPSTFGLLHNLSILEIPENLLSGNIPPQIGNCKSLEMLHLYTNELEGEIPSELGKLSKLRDLRLYENLLVGEIPLGIWKIRSLEHVLVYNNSLMGELPVEMTELKNLKNISLFNNQFSGVIPQTLGINSSLVQLDFTSNNFNGTLPPNLCFGKKLAKLNMGENQFIGRITSDVGSCTTLTRLKLEDNYFTGPLPDFETNPSISYLSIGNNNINGTIPSSLSNCTNLSLLDLSMNSLTGFVPLELGNLLNLQSLKLSYNNLEGPLPHQLSKCTKMSVFDVGFNFLNGSFPSSLRSWTALTSLTLRENRFSGGIPDFLSAFENLNELKLDGNNFGGNIPKSIGQLQNLLYDLNLSANGLVGELPREIGNLKSLLKMDLSWNNLTGSIQVLDELESLSELNISYNSFEGPVPEQLTKLSNSSSSFLGNPGLCVSLSLPSSNLKLCNHDGTKSKGHGKVAIVMIALGSSILVVVLLGLIYIFLVRKSKQEAVITEEDGSSDLLKKVMKATANLNDEYIIGRGAEGVVYKAAIGPDNILAVKKLVFGENERKRVSMLREVETLSKIRHRNLVRLEGVWLRENYGLISYRFMPNGSLYEVLHEKNPPQSLKWNVRNKIAVGIAQGLVYLHYDCDPVIVHRDIKTSNILLDSEMEPHVADFGLSKILDQSSSSSSTQSVNVSGTLGYIAPENAYTTVMGKESDVYSYGVVLLELISRKKAINPSFMEGMDIVTWVRSLWEETGVVDEIVDSELANEISNYDSNKVMKEVTNVLLVALRCTERDPRRRPTMRDVIKHLL* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3316 1088 Gene3D Ribonuclease Inhibitor 253 315 IPR032675 -
Mtr1g3316 1088 ProSiteProfiles Protein kinase domain profile. 806 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3316 1088 Gene3D Ribonuclease Inhibitor 184 252 IPR032675 -
Mtr1g3316 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 3 1086 - -
Mtr1g3316 1088 SUPERFAMILY L domain-like 493 725 - -
Mtr1g3316 1088 Gene3D Transferase(Phosphotransferase) domain 1 883 1088 - -
Mtr1g3316 1088 SUPERFAMILY L domain-like 45 300 - -
Mtr1g3316 1088 SMART serkin_6 806 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3316 1088 SUPERFAMILY Protein kinase-like (PK-like) 796 1087 IPR011009 -
Mtr1g3316 1088 Pfam Protein kinase domain 809 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3316 1088 SMART LRR_typ_2 89 113 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 401 424 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 185 209 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 616 640 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 210 232 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 353 377 IPR003591 -
Mtr1g3316 1088 SMART LRR_typ_2 544 568 IPR003591 -
Mtr1g3316 1088 Gene3D Ribonuclease Inhibitor 316 472 IPR032675 -
Mtr1g3316 1088 SUPERFAMILY L domain-like 274 535 - -
Mtr1g3316 1088 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Mtr1g3316 1088 Gene3D Ribonuclease Inhibitor 473 747 IPR032675 -
Mtr1g3316 1088 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Mtr1g3316 1088 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1086 - -
Mtr1g3316 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Mtr1g3316 1088 Gene3D Phosphorylase Kinase; domain 1 774 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3316 Mtr-Chr1 44375832 44379650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3316 19 1087 Receptor kinase-like Gene Family AT1G73080 51.101 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g3316 Pkinase 6.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3316 - - gmx:100817655 1488.78