Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3298 ATGCCTGGATTTCCTGTTACGGCTGATGAACCATGTGATTTTACAAGCACAGATCAACAACCTAGACCTCTAGATACTAGTGCGGATTTATCTGTAGCAGAGAAAGTCGCTGGGGAATGGACTTTTACAGGTTTTTGCAAGCCTATAGAGTTTTACAACGTTCTTCTTCATCGTCCGCGATTATTCCTTCCAAGATGTTTGAAGTACAGGATAGATGCTAGCCAAGAGAAAAGGATACAAATGACAGTTATACTCTCATGGAGCAATGAAGAAACACAAAATATGTTTCCTTTGTACATCAGTCTAGCAAGGCGTGACTTTAATAATGAAGATGCTGATTATTCTGCTGTTTATCTACTCGGTCAGATATTAACCTTTCGAGGTTCCTCCGGCATTGATGGGATAAATGAAATCAAAGCAAAGTTTGTGCTCTCTGAAGTTAATAAGTTAGCTGTGGAGGCTAGAGCTGGCTCACTTTTTCTCTTGTTTTTCACCACTGAGGGAAACTCAAATTCATCATCTAGAGTCAATGCAAGCCTAGGGCCTTCAGATCAGACTTCTCATGAACCAATAGCCGAAAATACCTGCTTATATGGGAAAATTTCTTTTCAATCAATTTATACGGCTTGGGATAACTCTCCAAATTTCCGTTGGGGACAACGAGCTGAGATTATGACTACTCTCAATTTGCTTCCATGTATTTTAAAGTATGATTTTGAAAATAAGGGCACAACCATCGCAATTCAAGATCTCCGGAATTCTGAGATTGTGAGTACATCAAAGAGTGTTCATATCAAAATATTTGCTGAAGAGTTTGGGGCCATGGAAAAATCTCTCTACCATGCAAATACTATCAATGATGTACCATCATCATCAACATCATCATCATCATCAACACCGTCATCACCATCGTCATCATCGTCATCTTCTCGCATTATTCGGTCGAAAGAAGGAAGAGTGGCATTTAATTACAGGTATTACAAAAACAGATTGCAGAGAAGGGAAGTCACTGAGAATTTCTCCTGCCCATACTGTTATCTAAGATGTGCAAGCTATAAGGGTCTAAGATGTCACTTGTTAGCATCACATGATCTTCTCAACTTTGAATTCTCGGCATCGGAAGATTGTCTGGCTGTTAATGTATCTAAGAAATATGATATCTGGAAATTTGAGTTTATTGCAGATGGTATTGATCCAAGATTGCAGACTTTTATGCATTGTGGCAAGCGAACCATACAGGTTAGGCCAGAAGCTGCACGTTTTGAAGAGTTCCAGGATGTGGACTCACCGGCTTTAGCTGATAATGCAGACCCACCCGTATTAGCTACGGATGTGGATCTACCTATCCTAGCTAATGATTTAGACTCTCCGATCTTAGCCATAACTAATAATGCAGACCCACCGGTCTTAGCTATGGATTTGGACCCACTGGTCCTAGCTAATGATGCTGACTCTCCAGTCTTGGCCTTAACTAATAATGCAGACCCACCAGTCTTAGCTATGGATGTGGACCCACCGGTCTTGGCTAATGATGCAGGCTCACCGGTCTTAGCTAATGATGTAGGCTCACCGGTCTTAGCTAATGATGTAGACTCGCCAGTCTTAGCTATGGATTCAGATCCACCAATCATGGCTATTGATGAAGACCCACCGATCTTGGCTATGGATGCAGATCCACCGGTCTTTGATTCTGGAACTACTTTAGAAGATATTGAATTTTTGAAGAAGGCGGGCGGAAATTCTGCAACTACATCAGGGGTTGCAAACACAAATATTGTATCTAATCTCAATCCAGATTGTGTCCCACCAGTATCTGAGCATGATAACGGGACTCCTTCAGCGCAACAGGCTGGCAATACAAGGAAGTTACCAGTTGAGCAAATTACCCCACAAATGATAGCCCAGTTGGAGAAGCGCGAATTTTATCATTCTCACAAAGCCCAGCCAATGTCACTTGAAGAAGTTCTATCAGGTTATGATAGTGAGGCTGAAGTTGATAATGAAGTTTTAGACATTGAAGACCGATGGAGACTTAATCTTCATGATAATGCGACCAAAGAAGAGAAGCAGTTGATGACCATGTGGAACTCGTTTATTCGGAGGCAACGTGTGCGGGTAGATGCTCACGTTCGTTGGGCATGCAAGGCTTTCACAATTAAGCATGGCTCTGAGATTGTTAAATCGCGCGAATTATCTAAGGATTGGACAGCGTTCAGGCTCAAACTATATACTGAGGGTCTTATAGATGCAAAGATCATCAATGATTGCGGTACTGTTCTCAAACATTACCGGGAAAATCCTGATATCAGATTCCCAGAACGAAGGATACCGTCCATTCTTTTGTCCCCTGTTAAAAATAGAAGAAAAAGATGA 2373 0.4159 MPGFPVTADEPCDFTSTDQQPRPLDTSADLSVAEKVAGEWTFTGFCKPIEFYNVLLHRPRLFLPRCLKYRIDASQEKRIQMTVILSWSNEETQNMFPLYISLARRDFNNEDADYSAVYLLGQILTFRGSSGIDGINEIKAKFVLSEVNKLAVEARAGSLFLLFFTTEGNSNSSSRVNASLGPSDQTSHEPIAENTCLYGKISFQSIYTAWDNSPNFRWGQRAEIMTTLNLLPCILKYDFENKGTTIAIQDLRNSEIVSTSKSVHIKIFAEEFGAMEKSLYHANTINDVPSSSTSSSSSTPSSPSSSSSSSRIIRSKEGRVAFNYRYYKNRLQRREVTENFSCPYCYLRCASYKGLRCHLLASHDLLNFEFSASEDCLAVNVSKKYDIWKFEFIADGIDPRLQTFMHCGKRTIQVRPEAARFEEFQDVDSPALADNADPPVLATDVDLPILANDLDSPILAITNNADPPVLAMDLDPLVLANDADSPVLALTNNADPPVLAMDVDPPVLANDAGSPVLANDVGSPVLANDVDSPVLAMDSDPPIMAIDEDPPILAMDADPPVFDSGTTLEDIEFLKKAGGNSATTSGVANTNIVSNLNPDCVPPVSEHDNGTPSAQQAGNTRKLPVEQITPQMIAQLEKREFYHSHKAQPMSLEEVLSGYDSEAEVDNEVLDIEDRWRLNLHDNATKEEKQLMTMWNSFIRRQRVRVDAHVRWACKAFTIKHGSEIVKSRELSKDWTAFRLKLYTEGLIDAKIINDCGTVLKHYRENPDIRFPERRIPSILLSPVKNRRKR* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3298 790 Pfam VEFS-Box of polycomb protein 623 757 IPR019135 -
Mtr1g3298 790 PANTHER POLYCOMB GROUP PROTEIN 26 771 - -
Mtr1g3298 790 MobiDBLite consensus disorder prediction 1 25 - -
Mtr1g3298 790 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 26 771 - -
Mtr1g3298 790 MobiDBLite consensus disorder prediction 289 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3298 Mtr-Chr1 44247179 44264492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3298 586 762 C2H2 Transcription Factor Family AT5G51230 42.938 1.48e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3298 - - mtr:MTR_1g090240 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3298 1 44247179 44264492 Mtr1g3298 1 44247179 44264492 ECH