Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3283 ATGAGTAATGAGGACCCTGGAATTTCAGGCTATCAATATAAAGGTACAACAAGTGTTGTGTTTAGTGACATAACCTCTTCTGATAAAGACGATGAAGATAATATATGTCTACAGACCGGTGAAGAATTTTCTGCGGAGTTCTTACGTGATCGGGTTGCTTTAAGGAGACTTCCTGTTATAACTGACTCAGAGCAGCACCTGCCAAACAGATTGGACTTCAATACAATTAATAATAGTAACAATTACCAACTGGTTCATGAGAATCAAAATCATGTTCTTGGACTAGGGAGAATGGGTTCTGATAGTAATTTGGATTTGTCAGAGATTGCTTTAGCTAGAGGCTATGTTGCTGAAGTTGATAACAGAGGTTATCATAATAATTTGAGCAGATACCAGTGTGAACACGGTCCTATAAGACAAGCATCAAGTGCGTTTTCAAGACAATTATCTGGTAGGTTTTCTGATGGAAGTGATCAAGGTTCCTCGATACCAAATACTCCAACCATTTATGCTGTTGAGTCTCCTCGTTCGTGCCATCCTTATGGAACAGTATTCTCAGAAGGTTCCTTTTACAAAAAGATAAAGTTTCTATGTAGTTTTGGAGGTCGAATACTGCCAAGGCCAAATGACGGGAAGCTGAGATATGTCGGTGGGGAGACACGGATTATATCGATTGGGAAAAACATGACACACGAGGAACTTACGGGGAAGACTTATGGTATTTGCAATCAAACCCACATTATCAAATACCAACTCCCTGGAGAGGATCTTGACGCTCTTATTTCTGTTTGTTCCGATGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGATCTCAACGACTTAGGATTTTTCTCGTAACTTCAAATGAATCTGAGAGTCCAAGTTCTAATGAATTAAGAGTCAATCAACAAAGTGACGTCGATTATCACTATGTTGTTGCTGTTAATGGTATGCTGGATCCAAGTCCGCGAAAGAATTCTAGTGGGATGAGTTTGGCAAGTCACACAAACCAGTTTGCAAATACCTCTGATTACAACAGTCCACATTTCCATAGGGAATCATCCACATCTTCATTTGATTCAGAAGCAAAGGATTGCAACCCAACCTCTTCAAAGTTGACAAGCATAATGTCAAAACGAGGTCCATATTTAACAGCATTAAATGTACCAGGAAGGTCATTTAATCAAAAGCCTCCATCTCCCATCCGCGTACTGCCTAAAGATCTAAAAATATCTAAAGTTCAGTTATTTAAGGATCAACCATATAATGTTGCTAATGAAAACATTATTCCCTTTGTCGCAGAAAAAGTTCCAGGTGACAACTCTTTGTATGTAGACAATACCAATTTTGTTAATCCGATTGCTTATTATAACAAACTTCCTCAAGGGTCTCCATGTGTGAACTGTCATCCTAGTAATCAATATACATTGGAGTCTGACCATGTCAAGAAGTCTAATGATGAGTTTCATTTTCACAAACGAAGCAATAGTAATGAATTTGTCTCTTCTGCAATTTGTAATCAAAGAGATATGATATTCGAGAGACCTTTAGTTAACAACGAATTAGGTTCATACCATTTTAACAAGATTGTCTCTTATCATCCTCACGAGTCATCGAGTGTATTTTCGGTGTCTAATGACAGAGATGTATCTCAGTATAGAATGTTGCATGCACTTTCCGACTCAACACTTCTAGAGAATAGTGAGAACTACAAAGGCCAATTGCAATTTCCGCTTAATGTTGAGAGAGACAAATTGTCATCACTAGAAACTTCGAGTTCTTTGGGAGAATGTTCGGTACATCTAGGAGAGATAAATGATGGGAAAGAACGTATGATTTTACATCAAAACTTGCCGACTTTTGGAACAAGCACTAGTTTCAAGAGATTGTCAGAAATTGGTACAGAGAACTTACACTGCAAAGATAAAAACATTGGTTGGCTCAATGAAAAAGTTGGAGTTATGCCAAAACACTTACAACACATATACTACCAGCATGGTGCCTCCTCATCTTCACCAGATTTACAAAGCAGTGGATACAATGCATCTGCTGCACCTTTTATCTCTTCACAGTCCATTGGAAGTATGACAGAGCAACCCCATGGTATACCATTAGACACAATTGCTTATGAGTTTTCTGTGACGAGCCAAAATTCATCAACACACCAATATGATGTGTCGGAGACAAAAGATGGCCAACCACCTCCCCCTGGCTCTTTTGAATTACGATCTACTGAGTCCCAAATTGACACAGAGTCTACACTAGCTATCTCATATCCAGATATGGTTTCTTCTTCACTAAGAGAGGTTGTTGTCCATGACGACAATCCTGCATACTACCAGAACCAAAAGGACGAAAACATAGTCACTGACAAACGATATTATGAATACATTGATGAATTTTGCATCAATAAGCCAAAATCAGCAGCAGTTGTCAAAGAGACGGTTGAGTATATATCTTTAGGTATCCAATCATGCTTACAAGCCGTGTCAAATACAGCGGAAGAGGACAAACACACATCTCTTGAAAAAGCAGGGGTATTGTGTGTTATTCCAGAATTTGAAAGTAAGCCTCCAAAAGCTGATAGTGGAAACTTCACTAAGCCTATGGGTGATTCAAAAACATCTGAAATAGAGTCTGAACTTCATGGTTTACAGATTATTGAGAATGGTGATATCGAAGAACTACATGAGTTAGGATCTGGAACCTTTGGAACCGTGTATCATGGCAAATGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAATAGTTGTTTTGCTGGTAGATTTTCCGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCAAAGATTCTATCAACTCTTCACCATCCAAATGTGGTGGCATTTTACGGAGTAGTTCCAGATGGCCCAGGTGGAACATTGGCAACTGTAGCAGAATATATGGTACATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAAAGAGTACTTGACCGTCGTAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAACTTGGGCGATCCAGAACGACCTGTATGTAAGGTTGGAGATTTTGGCCTATCAAGAATTAAACGCAACACACTTGTTTCGGGTGGTGTCAGAGGGACCCTTCCATGGATGGCACCAGAATTATTGGATGGTAATAGTTCCAGAGTATCTGAGAAGGTTGATATTTTCTCATTCGGCATCACAATGTGGGAAATCTTGACCGGAGAAGAACCTTATGCAAATATGCATTGTGGTGCCATCATAGGAGGTATTGTCAGTAATACGCTTAGGCCATCTATTCCAAAACGTTGTGATTCTGAGTGGAAAAGGTTGATGGAAGAGTGTTGGAGTCCTGATCCTGAAATCAGACCATGCTTCACAGAAGTCAAAAATAGACTTCGTAACATGTCAGCTGCACTGCAGAAAAAGAGGCCGAATATTGGAAACCGGTGA 3543 0.3932 MSNEDPGISGYQYKGTTSVVFSDITSSDKDDEDNICLQTGEEFSAEFLRDRVALRRLPVITDSEQHLPNRLDFNTINNSNNYQLVHENQNHVLGLGRMGSDSNLDLSEIALARGYVAEVDNRGYHNNLSRYQCEHGPIRQASSAFSRQLSGRFSDGSDQGSSIPNTPTIYAVESPRSCHPYGTVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIGKNMTHEELTGKTYGICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLVTSNESESPSSNELRVNQQSDVDYHYVVAVNGMLDPSPRKNSSGMSLASHTNQFANTSDYNSPHFHRESSTSSFDSEAKDCNPTSSKLTSIMSKRGPYLTALNVPGRSFNQKPPSPIRVLPKDLKISKVQLFKDQPYNVANENIIPFVAEKVPGDNSLYVDNTNFVNPIAYYNKLPQGSPCVNCHPSNQYTLESDHVKKSNDEFHFHKRSNSNEFVSSAICNQRDMIFERPLVNNELGSYHFNKIVSYHPHESSSVFSVSNDRDVSQYRMLHALSDSTLLENSENYKGQLQFPLNVERDKLSSLETSSSLGECSVHLGEINDGKERMILHQNLPTFGTSTSFKRLSEIGTENLHCKDKNIGWLNEKVGVMPKHLQHIYYQHGASSSSPDLQSSGYNASAAPFISSQSIGSMTEQPHGIPLDTIAYEFSVTSQNSSTHQYDVSETKDGQPPPPGSFELRSTESQIDTESTLAISYPDMVSSSLREVVVHDDNPAYYQNQKDENIVTDKRYYEYIDEFCINKPKSAAVVKETVEYISLGIQSCLQAVSNTAEEDKHTSLEKAGVLCVIPEFESKPPKADSGNFTKPMGDSKTSEIESELHGLQIIENGDIEELHELGSGTFGTVYHGKWRGTDVAIKRIKNSCFAGRFSEQERLTKDFWREAKILSTLHHPNVVAFYGVVPDGPGGTLATVAEYMVHGSLRNVLLKKERVLDRRKRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSRVSEKVDIFSFGITMWEILTGEEPYANMHCGAIIGGIVSNTLRPSIPKRCDSEWKRLMEECWSPDPEIRPCFTEVKNRLRNMSAALQKKRPNIGNR* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3283 1180 Pfam PB1 domain 209 293 IPR000270 GO:0005515
Mtr1g3283 1180 ProSiteProfiles Protein kinase domain profile. 900 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3283 1180 MobiDBLite consensus disorder prediction 351 381 - -
Mtr1g3283 1180 CDD PB1_UP2 197 292 - -
Mtr1g3283 1180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1025 1037 IPR008271 GO:0004672|GO:0006468
Mtr1g3283 1180 Gene3D Transferase(Phosphotransferase) domain 1 988 1179 - -
Mtr1g3283 1180 Gene3D - 212 296 - -
Mtr1g3283 1180 SMART serkin_6 900 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3283 1180 MobiDBLite consensus disorder prediction 727 755 - -
Mtr1g3283 1180 ProSitePatterns Protein kinases ATP-binding region signature. 906 927 IPR017441 GO:0005524
Mtr1g3283 1180 Gene3D Phosphorylase Kinase; domain 1 893 987 - -
Mtr1g3283 1180 SMART PB1_new 208 295 IPR000270 GO:0005515
Mtr1g3283 1180 PANTHER SERINE-THREONINE PROTEIN KINASE 84 1177 - -
Mtr1g3283 1180 Pfam Protein tyrosine and serine/threonine kinase 902 1163 IPR001245 GO:0004672|GO:0006468
Mtr1g3283 1180 PRINTS Tyrosine kinase catalytic domain signature 982 995 IPR001245 GO:0004672|GO:0006468
Mtr1g3283 1180 PRINTS Tyrosine kinase catalytic domain signature 1019 1037 IPR001245 GO:0004672|GO:0006468
Mtr1g3283 1180 PRINTS Tyrosine kinase catalytic domain signature 1090 1112 IPR001245 GO:0004672|GO:0006468
Mtr1g3283 1180 PRINTS Tyrosine kinase catalytic domain signature 1134 1156 IPR001245 GO:0004672|GO:0006468
Mtr1g3283 1180 CDD STKc_MAP3K-like 906 1163 - -
Mtr1g3283 1180 SUPERFAMILY Protein kinase-like (PK-like) 892 1163 IPR011009 -
Mtr1g3283 1180 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 84 1177 - -
Mtr1g3283 1180 SUPERFAMILY CAD & PB1 domains 209 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3283 Mtr-Chr1 44142086 44148100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3283 37 344 MAP Kinase Kinase Kinase AT1G16270 39.103 2.36e-41 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mtr1g3283 PK_Tyr_Ser-Thr 1.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3283 - - aprc:113872358 1619.75