Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3265 ATGAACATGAACATGAACATGACAATAATTATGAACATCCTCGTCCTCATCTTCACCACTCTCTTAACAACTTCCCACTCCGCCACGTGTCCTCTCAACTTCACCCTCTTAACCACCCTCAGCGGCGGCGGAGCCACCACAAAACCACCATCTTCCTTCACCTCAACACCATGCCAGTTCGTCCGGCAAGCTCTCCGCCTTGTCCAATCCGACTACCTCCGCCGCACCGACTCTTTCATCCCTCCATCAAACTCCTCCACAACATGCTGGGACTCTTTCCAATCCTACATCAACCAATTCGAACCAACCTTCAACATTCGTTCTTCTTGTGGCTTCCAAACTGAGTGGATCTCACAAGGTTGTGTCAACGTTACTACAAGACAACAATTTGAAGCACTTGTTCCTAAATCCAATATTCAAAATATGCAATCAAATTGTAACCAATCAATTCAAGATAACTCACCTTGTGCTCTTTGTACTACTAGTTTATCTGGTTTACCTTCTCTTGGTCAACCTATTGGTAATTTATCTGATTGTACCGGTTATCCTTCAATTTATGCTGCAGCTTTTGCAAATCAATTTGGACCGTCTGATCCTGGTACCGTTAAGTGTTTATTTCAACTTGATTTTACTTCAGGAAGTTCATCTGGTAGTAAGAAAAAGATTGTTGCTATTGTTGTTTCAATTGTTTCTGTTTTGGTTGTGTTGTCGATAGTTATAGGGTTTTGGGCTTATAGGAAATTTAATGATAAGGCAATTGGGGATGGTAAGGATCATGGTGCTAATATCGGTGAGTCCGTTTCGGTTTCTGGGTTGGGTTCAATGGATAATAGTACTACTTTGATTAGGTTTACTATTGATGATATTAAGAAGGCGACGAAGAATTTTCATAGGGATAATATAATTGGGAAAGGGGGTTATGGGAATGTGTATAAAGGGTTGTTGAATGATGGAAGTGAAGTTGCTTTTAAGAGGTTTAAGAATTGTTCTGCTGCTGGTGATACTAGTTTCACTCATGAGGTTGAGGTTATTGCTAGTGTTAGGCATGTGAATCTTGTTGCTTTGAGAGGTTATTGTAGTGCGACGACGCGGTTAGAGGGTTACCAGAGGATTATTGTTTGTGATTTGATGAAAAATGGGAGTCTTCATGATCATTTGTTTGAATCTAATGGGGCGAAACTTAGTTGGCCGGCTCGTCAGAAGATTGCTCTTGGAACTGCTAGGGGATTATCTTATTTGCATTATGGAGCTCAACCTGCTATCATTCATAGGGATATTAAAGCTAATAATATACTTTTGGATGATAAGTTTGAAGCTAAGGTTGCCGATTTTGGACTTGCAAAGTTTAATCCCGAGGGAATGACTCATATGAGTACTAGGGTTGCTGGAACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAATTAACAGAAAGGAGTGATGTGTTTAGTTTTGGTGTTGTGCTTCTTGAGCTATTGAGTGGAAGAAAGGCTCTTCAAACGAACGATGACGGACAACCTTCTGCTTTGACTGATTGGGCTTGGTCATTGGTTCGAACGGGAAAGGCATTGGATGTTATTGAAGATGGGATGCCAGAACAAGGTTCAGATCAAGTTCTTGAGAAGTATGTGTTGATTGCCGTGCTTTGTTCTCATCCACAGTTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAGACTGATGATGAATTAGTGCCCGCGATACCCGGACGGCCAATTCCTCTTGTTGCGGGGAGACTTGATATTGAGAGATCTGTTAGCGGATTTGGCTCAGGTCAGCTCTCTAGTCCGACAGGTTATCAATCGTTCACGTTAGAAATGGGAAGTGAACAAATGGAAAGTGAACGCCATTCTTCTAATCATTCTAGGGATGAAAGAAGCTCTGCCTCTAGGATTTTGAGTTCGGATTTGGATCAATAA 1956 0.4156 MNMNMNMTIIMNILVLIFTTLLTTSHSATCPLNFTLLTTLSGGGATTKPPSSFTSTPCQFVRQALRLVQSDYLRRTDSFIPPSNSSTTCWDSFQSYINQFEPTFNIRSSCGFQTEWISQGCVNVTTRQQFEALVPKSNIQNMQSNCNQSIQDNSPCALCTTSLSGLPSLGQPIGNLSDCTGYPSIYAAAFANQFGPSDPGTVKCLFQLDFTSGSSSGSKKKIVAIVVSIVSVLVVLSIVIGFWAYRKFNDKAIGDGKDHGANIGESVSVSGLGSMDNSTTLIRFTIDDIKKATKNFHRDNIIGKGGYGNVYKGLLNDGSEVAFKRFKNCSAAGDTSFTHEVEVIASVRHVNLVALRGYCSATTRLEGYQRIIVCDLMKNGSLHDHLFESNGAKLSWPARQKIALGTARGLSYLHYGAQPAIIHRDIKANNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTNDDGQPSALTDWAWSLVRTGKALDVIEDGMPEQGSDQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDDELVPAIPGRPIPLVAGRLDIERSVSGFGSGQLSSPTGYQSFTLEMGSEQMESERHSSNHSRDERSSASRILSSDLDQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3265 651 Pfam SPARK 26 166 IPR043891 -
Mtr1g3265 651 ProSiteProfiles Protein kinase domain profile. 296 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3265 651 MobiDBLite consensus disorder prediction 600 651 - -
Mtr1g3265 651 MobiDBLite consensus disorder prediction 600 621 - -
Mtr1g3265 651 PANTHER OS01G0253100 PROTEIN 16 626 IPR045271 GO:0004714|GO:0006468
Mtr1g3265 651 SUPERFAMILY Protein kinase-like (PK-like) 279 578 IPR011009 -
Mtr1g3265 651 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3265 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Mtr1g3265 651 Gene3D Phosphorylase Kinase; domain 1 266 375 - -
Mtr1g3265 651 MobiDBLite consensus disorder prediction 622 643 - -
Mtr1g3265 651 Pfam Protein kinase domain 296 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3265 651 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Mtr1g3265 651 CDD STKc_IRAK 302 571 - -
Mtr1g3265 651 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 16 626 - -
Mtr1g3265 651 Gene3D Transferase(Phosphotransferase) domain 1 377 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3265 Mtr-Chr1 43962053 43964421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3265 7 617 Receptor kinase-like Gene Family AT2G48010 61.489 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mtr1g3265 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3265 - - gmx:100800760 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3265 1 43962053 43964421 Mtr1g3265 1 43962053 43964421 ECH
Mtr7g2758 7 44315105 44317543 Mtr1g3265 1 43962053 43964421 ECH