Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3264 ATGAAGGAAAAAGTGGATTCACCTATTACAGTTCTTGAGGACTATTTCAGAAGTTCAGATTCAGAATCAAGTTCTTCCAAAGAACCTACTTTGGATTCTGAGTCTAATGATGACATTTCAAAACCTGTTTCAAGGTGGCATTCATTTCTTCAATTGTTGAAAAGCAGATCAAAGAAACAGTTACCTGCATTGAATCATCCTCTTAATGGACAATTCTCAAGAAGAATGAGCAGAAGCATGAGGGAAACCATTCTTCCAAGTTGTCTCACTCTTGCAAATGCAACTTCAACACCTTGTAGATCACCATGGAAAATCTTTTCTCATCATGATATACAAGTTGCAACCAATAATTTTAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCTGAAGTGTACAAAGGTTGTTTGCCTAATCATCGATTAGTAGCAATCAAACGGTTAACAAGAGGAACTCCTGATGAAATTATAGGAGACTTTTTATCCGAACTTGGTGTAATGGCGCATGTAAACCATCCGAATACTGCTAAGCTGGTTGGCTATGGAGTGGATGGAGGAATGTATCTAGTTCTTGAATTATCTGAAAAAGGGAGTCTAGCTTCAGTGCTATATGGTTCCAAGGAGAAAGTACAATGGTGTATTAGGCAGAAAATTGCATTAGGAACAGCAAAAGGTATATTATATCTTCATGAGGGTTGTCAAAAAAGATTTATCCACAGAGATATAAAAGCTGCAAATATCTTGCTCACAGAGGACTTTGAGCCTCAGATTTGTGATTTTGGCCTAGCAAAATGGTTGCCAGAGAATTGGACTCACCATAACGTTTCAAAATTTGAAGGAACTTTTGGCTACCTTGCTCCAGAATACTTACTTCATGGCATAGTAGATGAGAAAACAGATGTATTTGCATTTGGTGTATTGCTATTAGAATTGGTCAGTGGGAGAAGAGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGTTGAAAAAGAATGATATTATGGAGCTGGTAGATCCTTCACTAGCAGGTGAATTTGACTTTAGGCAGATGAATCTTATGCTCTTGACAGCTTCTTTATGCATACAACAGTCCTCCATTCGCCGTCCCTCTATGAGACAGGTTGTGCAGCTTCTGAACGGAAACCTTAGTTGCTTCAAGGCCATGAAGAAATCTCGATTGCCATTCTTCCAAAAAGTATTTCAGGAAGAGCTCCTTGATTCTGATTAG 1242 0.3824 MKEKVDSPITVLEDYFRSSDSESSSSKEPTLDSESNDDISKPVSRWHSFLQLLKSRSKKQLPALNHPLNGQFSRRMSRSMRETILPSCLTLANATSTPCRSPWKIFSHHDIQVATNNFSQENLIGKGGYAEVYKGCLPNHRLVAIKRLTRGTPDEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKVQWCIRQKIALGTAKGILYLHEGCQKRFIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHNVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELVDPSLAGEFDFRQMNLMLLTASLCIQQSSIRRPSMRQVVQLLNGNLSCFKAMKKSRLPFFQKVFQEELLDSD* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3264 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Mtr1g3264 413 MobiDBLite consensus disorder prediction 14 30 - -
Mtr1g3264 413 SMART serkin_6 118 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3264 413 Gene3D Phosphorylase Kinase; domain 1 92 192 - -
Mtr1g3264 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3264 413 Gene3D Transferase(Phosphotransferase) domain 1 195 398 - -
Mtr1g3264 413 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 411 - -
Mtr1g3264 413 SUPERFAMILY Protein kinase-like (PK-like) 97 383 IPR011009 -
Mtr1g3264 413 PANTHER OS08G0249100 PROTEIN 1 411 - -
Mtr1g3264 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Mtr1g3264 413 MobiDBLite consensus disorder prediction 1 39 - -
Mtr1g3264 413 ProSiteProfiles Protein kinase domain profile. 118 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3264 Mtr-Chr1 43948390 43951784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3264 106 385 Receptor kinase-like Gene Family AT1G53420 41.667 3.57e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr1g3264 Pkinase 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3264 - - gmx:100780587 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3264 1 43948390 43951784 Mtr1g2919 1 40458809 40463698 ECH
Mtr1g3264 1 43948390 43951784 Mtr7g3709 7 54046419 54051829 ECH
Mtr1g3264 1 43948390 43951784 Mtr1g3264 1 43948390 43951784 ECH
Mtr2g0694 2 7058966 7062481 Mtr1g3264 1 43948390 43951784 ECH