Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3256 ATGGGTTCGAAACCGTGGCTATATCCTGCTCCAACGTATAAACCGATAGAAAGTTTTTGGGATACTGATGAAGACGCACCTGGTCCTCGCTGTGGTCATACTCTCACCGCCGTCGCCGCCACTAAGTCGCATGGTCCACGGTTGATTCTCTTCGGTGGCGCCACTGCCATTGAAGGAGGATCTACTTCAGCTCCTGGCATTCGATTAGCTGGAGTTACGAATTCAGTTCATGCTTATGATGTTGATTCAAAAAAATGGACTAGGATTAAACCGGCCGGAGACCCGCCCTCTCCTCGAGCTGCTCATGCCGCAGCCACCGTTGGCACAATGGTTGTTTTTCAGGGTGGGATAGGTCCGGCCGGGCATTCTACTGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAAGGACCAGGGCCTCGATATGGCCATGTAATGGACTTGGTTGCTCAGAGGTATCTTGTTACCGTCAGCGGAAATGATGGGAAACGAGTTGTGTCTGATGCTTGGACTTTGGATACGGCTCAAAAACCTTATGCGTGGCAGAAGCTGAACCCAGAAGGTGACAGGCCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTTTGTGGTGGAAGAGACTCTTCTGGAACTCCACAAGCAGATGCCTATGGACTTCTCATGCATAGGAATGGCACGTGGGAATGGACTCTTGCTCCCGGAGTTTCCCCTTCACCTAGGTATCAACATGCATCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTTAGGGGTGGGCGAGCTGTCGAAGGTGAACCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGATAGAAATGGCATTGTGTCCTCGTCACGCTCAAACAAAGGTCATGATTATGATCATTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCAAGTCTATATCTATGGTGGTCTTAGAGGAGATCTACTACTGGGTGATTTCTTAGTGGCTGAAAATTCACCATTGCAGCCTGTCATCAATGAGAGAGGTTCACCTCTTACAAGTCCCAAACACAATCAGTCTAACTTCAACTATAATGCAAAAACACCAAGTATGGATGGTGGATTAGAAATCCCGTCATCTGGTGGCTCAGGCTTGGACAAAGTTTCCCTGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCCGAGGCCGCCAGTGCTGTCTGGCAATCTGTGCAAGCTATATCAAGTAGTCCTGCTGATGAAACATTTGTGTCAGATGACAACTCACATGCTGCCGACACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCACCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTAGGTGGATTGGTGAGACAATTGTCCCTGGATCAATTTGAAAATGAAAGCAGACGCATGCTTCCCATAAATAATGATTCGCCATATCCTACAAAGAAGTTCACCAGGCAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCAAATTTGCTCAGGCCTCGCAACTGGAAAGCACCTGTAAATAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCCCCCGTCAAAGTATTTGGTGATCTTCATGGGCAGTTTGGTGATTTGATGCGGCTTTTTGATGAATATGGATTTCCTTCAACCGCAGGAGACATCACGTATATTGACTACCTGTTTTTAGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTACTACTTGCTCTTAAGATTGAATATCCTGACAATGTTCACTTGATACGTGGAAACCACGAAGCTGCTGACATAAATGCATTATTTGGTTTTCGTATAGAGTGCATTGAGCGAATGGGTGAAAATGATGGAATATGGGCGTGGACAAGATTCAATCAACTTTTTAACCATCTTCCACTCGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGATCTATCCATTCAGTAGAACAGATAGAGAAGATTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTCTTATGGTCTGATCCCACAGAAAATGATAGCGTGGAGGGTTTGAGACCAAATGCTAGAGGCCCAGGGCTAGTCACTTTCGGGCCTGATCGTGTTACAGAATTCTGTAAGAAAAATAAATTACAGCTCATCATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAAGGACAATTAATCACACTTTTTTCTGCAACCAACTACTGCGGAACTGCAAATAATGCGGGAGCTATACTGGTGGTAGGCAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCGATACCCCCTCCCCTTCAGTCACCAGAGTCTTCTCCTGAGCGTGTCATGGACGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGAGGTCGACCACAGCCTGACCTTGACCGTGGCTCCCTAGCGTATATATGA 2640 0.4621 MGSKPWLYPAPTYKPIESFWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSTSAPGIRLAGVTNSVHAYDVDSKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWTLDTAQKPYAWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGTPQADAYGLLMHRNGTWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEPSIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDHSLELMRRCRHAAAAVGVQVYIYGGLRGDLLLGDFLVAENSPLQPVINERGSPLTSPKHNQSNFNYNAKTPSMDGGLEIPSSGGSGLDKVSLEKLREASAAEAEAASAVWQSVQAISSSPADETFVSDDNSHAADTVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGLVRQLSLDQFENESRRMLPINNDSPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPVNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNHLPLAALIEKKIICMHGGIGRSIHSVEQIEKIERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPESSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3256 879 PIRSF STPPP_BSU1 1 879 IPR012391 GO:0004721|GO:0009742
Mtr1g3256 879 Gene3D - 509 849 IPR029052 -
Mtr1g3256 879 MobiDBLite consensus disorder prediction 854 879 - -
Mtr1g3256 879 MobiDBLite consensus disorder prediction 440 463 - -
Mtr1g3256 879 Pfam Galactose oxidase, central domain 115 155 - -
Mtr1g3256 879 Pfam Galactose oxidase, central domain 45 105 - -
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 576 603 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 611 638 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 644 668 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 682 708 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 712 739 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 772 792 IPR006186 GO:0016787
Mtr1g3256 879 PRINTS Serine/threonine phosphatase family signature 794 810 IPR006186 GO:0016787
Mtr1g3256 879 MobiDBLite consensus disorder prediction 440 456 - -
Mtr1g3256 879 Gene3D - 6 193 IPR015915 GO:0005515
Mtr1g3256 879 ProSitePatterns Serine/threonine specific protein phosphatases signature. 645 650 IPR006186 GO:0016787
Mtr1g3256 879 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 879 - -
Mtr1g3256 879 SMART pp2a_7 548 832 IPR006186 GO:0016787
Mtr1g3256 879 SUPERFAMILY Kelch motif 73 356 IPR015915 GO:0005515
Mtr1g3256 879 Gene3D - 194 359 IPR015915 GO:0005515
Mtr1g3256 879 SUPERFAMILY Metallo-dependent phosphatases 529 839 IPR029052 -
Mtr1g3256 879 Pfam Calcineurin-like phosphoesterase 576 783 IPR004843 GO:0016787
Mtr1g3256 879 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3256 Mtr-Chr1 43844019 43854656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3256 577 775 Calmodulin-binding Proteins AT5G63870 33.043 3.90e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3256 K01090 - gmx:100805538 1613.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3256 1 43844019 43854656 Mtr1g3256 1 43844019 43854656 ECH