Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3246 ATGAGAGTTGAGTTTTGTTACAAATTCAAACTCCACTCACATGGTTTTGCTATATACACAGTACATCCCATTTGTGATATAACAGATTTACCAATTCTTACAATTTTAGCAAACATCAATTCAACAACCATGTTACGTATCTTTTGGTCTATCATATGCCACATTCTCTTTGCTTCAAATTTCCTCAACAATTCAGCCTCTGCCTTAGGAAACATCACTGACCATTCTGCATTACTCAAATTCAAAGAATCAATGTCCAGTGACCCTTTTGGAGTATTAAACTCTTGGAATAGTTCTACCCACTTTTGCATGTGGCATGGAGTAACATGCGGTCATAGACATCAAAGAGTCACGGAGATCAAGTTGGTAGGATACAAACTACAAGGTTCTATATCACCCCACGTTGGTAATCTTTCCTTTCTGAGAGTCCTATACCTTGATGATAATAGCTTCCATGCCAATGTCCCTCGAGAATTAGGCCGTTTATTTCGACTGCAGGCCATCTCTTTTGCCAATAATACTTTAGGAGGTCGATTTCCAACCAGTTTGACAAATTGCACTCAGCTGAGGGAGATCGGATTATATGGTAATAATTTTACCGGTCAAATACCAATGGAGATTCACTCTCTTGCCAAGCTTGAATATTTTAATGTTGCAAGAAACAATCTAATTGGTCGAATTCCACCTTCTATATGGAATCTTTCTTCCCTCACTGTACTCGATTTTTGGTATAACCACTTGGAGGGAAACATACCAGAAGAAATAGGTTTTTTAAAAAAATTGACAAAGATGTCAGTCTCAGAAAACAAATTATCTGGTATGCTTCCCTTTTCACTTTACAATTTGTCATCTCTCACTCACCTCCACACAGCAGGCAATCAATTCCATGGTTCTCTTCCAACCAACGTGTTCACAACCCTCCCAAATATTAGGCAATTTTGGTTTGCTTCAAATCGATTCTCAGGTCCAATCCCATCATCCATCAGTAATGCATCTCGGATTCAAATGTTCGATATTGGTTTTAACAATTTTGTAGGACAAATTCCAAATCTTGGAAAGCTGCAGGATCTTTCTGTTTTGGCTGTAGGCGAAAATAATCTTGGCAGCAATTCATCATATAGTGGTGATGATTGGGAGTTTATAAAGTCTTTGGTAAACTGTAGTCAGCTTTATATAGTAATTGTTGAAAGTAATAACTTAGGAGGTCCTTTGCCCAAAATTATTGGCAATTTGTCCACCCATCTTGCACAATTTGCTATGGCTGACAATCAGATATCTGGAGAAATTCCAACAGAACTGGGAAATCTTGTAAACTTGATTTTCTTGTCCATAGAAAACAACCTCTTAACTGATGTTATTCCAGAGAGTTTTTCTAAGTTTCAAAAGATGCAAGAAATGTATTTAAAAATAAACAAACTTTCAGGTGAAATTCCGGCAACAATTTTAGGAAATCTCAGTCAGTTGTCTCAGTTGGATTTATCAGACAATTTGTTGATTGGAAAGATTCCGTCAACTATTGGAAATTGCAAAAAGTTGCAAGCAGTGGACTTCTCATTGAACAACCTTAGTGGTGCTATACCAACACAACTTCTTAGCCTTTCCTCCTTATCAATACTTCTTAACCTATCACATAACTCATTTAGTGGTAATTTGCCTCCTGAGGTGGTCATGCTTCAAAACATTGAGAGGTTTGATATATCTGAAAATCATCTCTCAGGTGGCATTCCTGAAAATATTGGAGATTGCTCAAGCCTGGAGTACCTATTTTTAGAGGGTAATTCTTTAGATGGAGTCATACCATCTTCTTTAGCTTCACTAAAAGGTCTTCTACAACTAGACCTGTCGCGAAACAACTTGTCAGGTTCAATTCCACAGGAATTACAAAACAATTCTGTTTTAGAATGGTTCAATGCTTCTTTTAACAAGTTGGAGGGCGAGGTGCCCATGCTTGGTGTTTTCCAGAATGCCAGTAGAGTTTCATTGACTGGCAATGACAGGCTTTGCGGCGGGGTAGCAGAACTGAATCTGAAAATTTGCCTACCAAAAAATGTGAAAAAGAGAAAACACCATATTCGTCGCAAGTTGATCATCATCATCATCTTCTCAATTGCATTTCTGCTTCTATTGTCATTTGTCCTTACTATCATCATCTATCAGATAATGAGGAAAAGGCAGAGAAAAACATCTGCTGATTCAACAATTGTGCAATTTCCGAAGGTATCATACCAAGAGCTACACCATGCCACAGATGGGTTCTCGGATCAGAACTTGATAGGAACCGGAGGTATAGGTTTTGTGTACAAAGGAAGACTTAATTCAGAAGAAAGAGTTGTTGCTGTAAAGGTTCTAAACCTTCAGAAGAAAGGAGCTCATAAAAGTTTCCTTGCCGAATGTAATGCTTTTAGAAATATCAGGCATAGAAATCTAGTCAAGATTATCACATGTTGCTCTAGTGTGGATCACAAAGGTGACGACTTTAAGGCAATAGTTTATGAATACATGACAAATGGGAGCTTAGAGGAATGGTTGCATCAAAATGCAGAACACCAAAGAACTCTGAAATTTGAAAAAAGATTAGAAATTGTTAATGGAATCGCTTCAGCATTACACTATCTTCACAATGAATGTGAGAAGCCTATTGTTCATTGTGATTTAAAACCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCTTAGCCAGACTTGTTTCAACAATTGATGGCAAATCCAATAATCAAACCAGCTCAATGGGAATAAAGGGGACTATAGGTTATACTCCTCCAGAGTATGGAATGGATACTCAATTGTCAACAGAAGGCGACATGTATAGCTTTGGGATTCTTCTTTTGGAGATGATGACTGGGAGAAGACCAACCGATGAAATGTTTAAAGATGGGTACAACCTCCATAACTACGTTAAAATTGCATTTCCAAATAACATTTTGGAGATTGTTGATGCAACTCTCCTCTCAACGGAAAACAGTCATCTTTTAGTAACAACAGAGGTTGCAAGGGATTTGCATCCCAATGTTGAGAGGTCTTTATCTTCTTTATTTAAGATTGGATTATCTTGTTCAGTTGAGTCTGCAAGAGAACGAATCAATATCGAGGAAGTCAAAACTGAACTGAATATCATTTCAAAAGCTTTGGCTGATGAAGGGAAATAA 3186 0.376 MRVEFCYKFKLHSHGFAIYTVHPICDITDLPILTILANINSTTMLRIFWSIICHILFASNFLNNSASALGNITDHSALLKFKESMSSDPFGVLNSWNSSTHFCMWHGVTCGHRHQRVTEIKLVGYKLQGSISPHVGNLSFLRVLYLDDNSFHANVPRELGRLFRLQAISFANNTLGGRFPTSLTNCTQLREIGLYGNNFTGQIPMEIHSLAKLEYFNVARNNLIGRIPPSIWNLSSLTVLDFWYNHLEGNIPEEIGFLKKLTKMSVSENKLSGMLPFSLYNLSSLTHLHTAGNQFHGSLPTNVFTTLPNIRQFWFASNRFSGPIPSSISNASRIQMFDIGFNNFVGQIPNLGKLQDLSVLAVGENNLGSNSSYSGDDWEFIKSLVNCSQLYIVIVESNNLGGPLPKIIGNLSTHLAQFAMADNQISGEIPTELGNLVNLIFLSIENNLLTDVIPESFSKFQKMQEMYLKINKLSGEIPATILGNLSQLSQLDLSDNLLIGKIPSTIGNCKKLQAVDFSLNNLSGAIPTQLLSLSSLSILLNLSHNSFSGNLPPEVVMLQNIERFDISENHLSGGIPENIGDCSSLEYLFLEGNSLDGVIPSSLASLKGLLQLDLSRNNLSGSIPQELQNNSVLEWFNASFNKLEGEVPMLGVFQNASRVSLTGNDRLCGGVAELNLKICLPKNVKKRKHHIRRKLIIIIIFSIAFLLLLSFVLTIIIYQIMRKRQRKTSADSTIVQFPKVSYQELHHATDGFSDQNLIGTGGIGFVYKGRLNSEERVVAVKVLNLQKKGAHKSFLAECNAFRNIRHRNLVKIITCCSSVDHKGDDFKAIVYEYMTNGSLEEWLHQNAEHQRTLKFEKRLEIVNGIASALHYLHNECEKPIVHCDLKPSNVLLDDDMVAHVSDFGLARLVSTIDGKSNNQTSSMGIKGTIGYTPPEYGMDTQLSTEGDMYSFGILLLEMMTGRRPTDEMFKDGYNLHNYVKIAFPNNILEIVDATLLSTENSHLLVTTEVARDLHPNVERSLSSLFKIGLSCSVESARERINIEEVKTELNIISKALADEGK* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3246 1061 Gene3D Transferase(Phosphotransferase) domain 1 834 1059 - -
Mtr1g3246 1061 Pfam Leucine rich repeat 584 643 IPR001611 GO:0005515
Mtr1g3246 1061 Pfam Leucine rich repeat 442 498 IPR001611 GO:0005515
Mtr1g3246 1061 SMART serkin_6 752 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3246 1061 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Mtr1g3246 1061 SUPERFAMILY Protein kinase-like (PK-like) 730 1049 IPR011009 -
Mtr1g3246 1061 Pfam Protein kinase domain 753 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3246 1061 ProSiteProfiles Protein kinase domain profile. 752 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3246 1061 Pfam Leucine rich repeat N-terminal domain 73 110 IPR013210 -
Mtr1g3246 1061 Gene3D Ribonuclease Inhibitor 352 679 IPR032675 -
Mtr1g3246 1061 SMART LRR_typ_2 138 162 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 606 629 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 436 459 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 210 234 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 485 509 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 558 582 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 258 281 IPR003591 -
Mtr1g3246 1061 SMART LRR_typ_2 282 306 IPR003591 -
Mtr1g3246 1061 PANTHER OS04G0122200 PROTEIN 59 1054 - -
Mtr1g3246 1061 PANTHER LRR RECEPTOR-LIKE KINASE 59 1054 - -
Mtr1g3246 1061 Gene3D Phosphorylase Kinase; domain 1 715 833 - -
Mtr1g3246 1061 Gene3D Ribonuclease Inhibitor 72 351 IPR032675 -
Mtr1g3246 1061 SUPERFAMILY L domain-like 380 668 - -
Mtr1g3246 1061 SUPERFAMILY L domain-like 72 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3246 Mtr-Chr1 43725672 43729410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3246 73 1049 Receptor kinase-like Gene Family AT3G47570 44.287 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr1g3246 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3246 - - mtr:MTR_1g088940 2038.85