Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3245 ATGGCTGACAATCAAATATCTGGAAAAATTCCAACAGAACTGGGAAATCTTGTAAACTTGATTTATTTGTCCATAGAGAACAACTACTTAACTGAAGTTATTCCAGAGAGTTTTGCTAAGTTTCAAAACATGCAAGAATTGTATTTAGGAAAAAACAAACTGTCGGGTACCATTCCGGCGGCCTTTTTAGGAAATCTCAGTCACTTGTCTGAGTTTGATTTATCAAACAATTTGTTGATTGGAGAGATTCCCTCAACCATTGAAAATTGCAAAAAGTTGCAAATAGTAGACTTTTCAATGAACAACCTTAGTGGAGCTATACCAACACAACTTCTTGGCATTTCCTACTTATCAATACTACTCAACCTATCACATAACTCATTTAGTGGTAATTTGCCTCCTGAGGTGGGCATGCTTAAAAACATCGGGACACTTGATATATCTGAGAATCATCTCTCTGGAGGCATTCCCGAAAATATTGGAGATTGCTCTAGCTTGGAGTACCTATATTTAGAGGGCAATTCTTTAGATGGAATCATACCATCTTCTATAGCTTCACTAAAAGGTCTTCTACAACTAGACCTATCACGATACAACTTGTTTGGTTCAATTCCACAGGAATTACAAAATAATTCTGTGTTAGAATGGTTCAGTGCTTCTTTTAACAAGTTGGAGGGTGAGGTTCCCATGCATGGCGTTTTCCAAAATGCTAATAGAGTTTCATTGACTGGCAATGACAGGCTTTGCGGCGGGGTAGCAAAATTGAATCTACAGCGTTGCCCACCCAAAAGTTTGAAAAAGAGAAAACACCATGTTGGCCGCAAATTGATCATCATCATCATCATCTTCTCAATTGCATTTATTCTTCTATTGTCACTTGTCCTTACTATCATCATCTATCAGATAATGAGGAAAAGGCAGAGAAAAGCATCCACTGATTCAACAATTGAGCAATTTCCGAAGGTATCATACCAAGAGTTACACCATGCCACAAATGGGTTTTCGGTTCAGAACTTGATAGGAACCGGAGGTATAGGTTTTGTGTACAAAGGAAGACTTAATTCAGAAGAAAGAGTTGTTGCTGTAAAGGTTCTAAACCTTCAGAAGAAAGGAGCTCATAAAAGTTTCCTTGCCGAATGTAATGCTTTTAGAAATATCAGGCATAGAAATCTAGTCAAGATTATCACATGTTGCTCTAGTGTGGATCACAAAGGTGACGACTTTAAGGCAATAGTTTATGAATACATGAAAAATGGGAGCTTAGAGGAATGGTTGCATCAAAATGCAGAACAACAAAGAACACTGAAATTCGAAAAAAGATTAGAAACTGTTAATGGAATTGCTTATGCATTACACTATCTTCACTATGAGTGTGAGAAGCCTATTGTTCATTGTGATTTAAAACCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCTTAGCCAGACTTGTTTCAACAATTGATGGCAAATCCAATATTCAAACCAGCTCAATGGGAATAAAGGGGACTATAGGTTATACTCCTCCAGAGTATGGAATGGATTCTCAATTGTCAACAGAAGGCGACATGTACAGCTTTGGGACTCTTCTTATGGAGATGTTCACCGGGAGAAGACCAACTGATGCAATGTTTAAAGATGGACACAACCTCCATAACTATGTGAAAATTGCATTTCCAAATAACATTTTGGAGATTGTTGATGCAACTCTCTTCTCAGAGGAAAATGACCATCTTGCAGTTACAACAGATGTTGCAAGTGATTTGCGTCCTAATGTTGAGAGGTGCTTATCTTCTTTATTTAAGATAGGATTATCTTGTTCAGTGGAGTCTCCAAGAGAAAGAACCAATATCAAGGCAGTCATTGCGGAACTCAATATAATTTCAAAAGCTTTGGCTGATTAA 1923 0.3765 MADNQISGKIPTELGNLVNLIYLSIENNYLTEVIPESFAKFQNMQELYLGKNKLSGTIPAAFLGNLSHLSEFDLSNNLLIGEIPSTIENCKKLQIVDFSMNNLSGAIPTQLLGISYLSILLNLSHNSFSGNLPPEVGMLKNIGTLDISENHLSGGIPENIGDCSSLEYLYLEGNSLDGIIPSSIASLKGLLQLDLSRYNLFGSIPQELQNNSVLEWFSASFNKLEGEVPMHGVFQNANRVSLTGNDRLCGGVAKLNLQRCPPKSLKKRKHHVGRKLIIIIIIFSIAFILLLSLVLTIIIYQIMRKRQRKASTDSTIEQFPKVSYQELHHATNGFSVQNLIGTGGIGFVYKGRLNSEERVVAVKVLNLQKKGAHKSFLAECNAFRNIRHRNLVKIITCCSSVDHKGDDFKAIVYEYMKNGSLEEWLHQNAEQQRTLKFEKRLETVNGIAYALHYLHYECEKPIVHCDLKPSNVLLDDDMVAHVSDFGLARLVSTIDGKSNIQTSSMGIKGTIGYTPPEYGMDSQLSTEGDMYSFGTLLMEMFTGRRPTDAMFKDGHNLHNYVKIAFPNNILEIVDATLFSEENDHLAVTTDVASDLRPNVERCLSSLFKIGLSCSVESPRERTNIKAVIAELNIISKALAD* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3245 640 Pfam Protein kinase domain 335 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3245 640 Gene3D Ribonuclease Inhibitor 1 269 IPR032675 -
Mtr1g3245 640 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 638 - -
Mtr1g3245 640 SMART LRR_typ_2 66 90 IPR003591 -
Mtr1g3245 640 SMART LRR_typ_2 17 40 IPR003591 -
Mtr1g3245 640 SMART LRR_typ_2 139 163 IPR003591 -
Mtr1g3245 640 SMART LRR_typ_2 41 64 IPR003591 -
Mtr1g3245 640 Gene3D Transferase(Phosphotransferase) domain 1 416 637 - -
Mtr1g3245 640 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Mtr1g3245 640 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3245 640 SUPERFAMILY Protein kinase-like (PK-like) 312 631 IPR011009 -
Mtr1g3245 640 Pfam Leucine rich repeat 19 79 IPR001611 GO:0005515
Mtr1g3245 640 Gene3D Phosphorylase Kinase; domain 1 297 415 - -
Mtr1g3245 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mtr1g3245 640 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 638 - -
Mtr1g3245 640 SUPERFAMILY L domain-like 2 250 - -
Mtr1g3245 640 ProSiteProfiles Protein kinase domain profile. 334 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3245 Mtr-Chr1 43719135 43721151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3245 6 631 Receptor kinase-like Gene Family AT3G47570 45.283 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr1g3245 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3245 - - mtr:MTR_1g088935 1231.85