Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3244 ATGTTATTGTCACGTCTCTTTTGGTCTATATGCTGCATTGTCTTGTTTCTTCTCTTTACTTCAAATTTCCTGAACAAATCAGCCTCTGCCTTAGAAAACAACACTGACTATTCTGCATTACTCAAATTCAAGGAATCAATATCCAGTGACCCTTTTGGAGTATTAACCTCTTGGAATAGTTCTACCCACTTTTGCATGTGGCATGGAGTAACATGCGGTCATAGACATCAAAGAGTCATAAAGATAAAGTTGGTAGGATACAAACTGCAAGGTTCTATATCACCTCATGTTGGGAATCTTTCTTTTCTGAGAATCCTCTACCTTGATGATAATAGCTTCCAAGCCAATGTCCCGCGAGAATTAGGCCGTTTATTTCGACTGCAGGCCATCTCTTTGGCCAACAATACTTTAGAAGGTCAGTTTCCAATCAGTTTGACAAATTGCTCTCAACTAAGAAAGATCAATTTATATGAAAATCATTTGATTGGCCAAATACCGATGGAAATTCACTCCCTTGCCAAGCTTGAGTTTTTCAAGGTTGCAAGAAACAATCTAACCGGACGAATTCCACCTTCTATATGGAATCTTTCTTCCCTCACTATTCTCTCTTTTTCTGCTAACTACTTGGAGGGAAACATACCAGAAGAAGTGGGCCTTTTAAAAAACTTGACAAAGATGTCGGCGTCACGAAACAAATTATCTGGTAAGCTTCCCTTGTCACTTTACAATATATCTTCTCTCGCTTACCTCCACATTGGAGGAAATCAATTCAATGGCTCACTTCCAACCAACATGTTTACAACCCTCCCAAATCTTAGGCACTTTTGGGTTGGTTCGAATCGATTCTCAGGTCTGATCCCAACATCCATCAATAATGCATCTCGGATTCAAATGTTCGATATTGGTTTAAACAATTTTGAAGGACAAATTCCAAATCTTGGAAAACTACAAGATCTTTCTGTTTTGGCTGTAGCCGAAAATAATCTTGGCAGCAATTCATCATCCAGTGGTGATGACTGGGAGTTTATAAAGTCTTTGGTAAATTGCAGTCAACTTTATATAGTAATTGTTGAAAGTAATAACTTTGGAGGTGCTTTGCCCAAAATTATTGGCAATCTGTCCACCCATCTCTCAACACTTGCTATGGCTGGCAATCAGATATCTGGAAAAATTCCAACAGAACTGGGAAATCTTGTAAACTTGATTTTCTTGTCCCTAGCGAACAACCTCTTAACTGATGTTATTCCAGAGAGTTTTGCTAAGTTTCAAAACTTGCAAGTTTTGTCTTTACATATAAACAGACTGTCAGGTGAAATTCCAGCGACTTTTTTAGTAAATCTCAGTCACTTGTCTCAATTGGATTTAGCAAACAATTTGTTCATTGGAAAGATTCCTTCAACTATTGGAAATTGCAAACAGTTGCAAATAGTAGACTTTTCAATGAACAACCTTAGTGGAACTATACCAACACAACTTCTTAGCCTTTCCTACTTATCACTACTACTCAACCTATCACATAACTCATTAAGTGGTAATTTGCCTCCTGAGGTGGGCAAGCTTCAAACCATTGGGACGCTTGATATATCTGAAAATCATCTCTCTGGTGGCATTCCGGAAAATATTGGAGATTGCTTAAGCTTAGAGTACCTATTTTTAGAGGGTAATTCTTTCGACGGAATCATACCATCTTCTTTAGCTTTACTAAAAGGTCTTTTACAACTAGACCTGTCACGAAACAACTTGTCTGGTTCGATTCCACAGGAGTTACAAAAAAATTCTGTTTTAGAATTGTTCAATGCTTCCTTTAACAAGTTGGAGGGTGAGGTCCCCATGCTTGGCGTCTTCCAGAATGCTAGTAGAGTTTCATTGACTGGCAATAACAGGCTTTGTGGCGGGGTAGCAAAACTGAATCTGCAACTTTGCCCTCCAAAAAATGTGAAAAAGAGAAAGCACCATATTCGCCGCAAGTTGATCATCATCTTCTCAATTGCATTTCTTCTTCTAGTGTCATTTGTCGCTACTATCATCATCTATCAGATAATGAGGAAAAGGCAGAGAAAAGCATCCACCGATTCAACAATTGAGCAACTTCCAAAGGTATCATACCAAGAACTACACCATGCAACTGACGGGTTCTCGGTTCAGAACTTGATAGGAACTGGAGGTACAGGTTTTGTGTACAAAGGAAGACTTAATTCAGAAGAAAGAGTTGTTGCTGTAAAGGTTCTAAACCTTCAGAAGAAAGGAGCTCATAAAAGTTTCCTTGCCGAATGTAATGCTTTTAGAAATATCAGGCATAGAAATCTAGTCAAGATTATCACATGTTGCTCTAGTGTGGATCACAAAGGTGACGACTTTAAGGCAATAGTTTATGAATACATGACAAATGGGAGCTTAGAGGAATGGTTGCATCAAAATGCAGAACACCAAAGAACTCTGAAATTTGAAAAAAGATTAGAAATTGTTAATGGAATCGCTTCAGCATTACACTATCTTCACAATGAATGTGAGAAGCCTATTGTTCATTGTGATTTAAAACCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCTTAGCCAGACTTGTTTCAACAATTGATGGCAAATCCAATAATCAAACCAGCTCAATGGGAATAAAGGGGACTATAGGTTATACTCCTCCAGAGTATGGAATGGATACTCAATTGTCAACAGAAGGCGACATGTATAGCTTTGGGATTCTTCTTTTGGAGATGATGACTGGGAGAAGACCAACTGATGAAATGTTTAAAGATGGGTACAACCTCCATAACTACGTTAAAATTGCATTTCCAAATAACATTTTGGAGATTGTTGATGCAACTCTCTTCTCAGAGGAAAATGACCTTCTTGCAGTTACAACAGAGGTTGCAAGTGATTTGAATCGTAATGTTGAGAGGTTCTTATCTTCTTTATTTAAGAGGATTATCTTGTTCAGTGGAGTCTCCAAGAGAAAGAATCAATATCAAGGATGTCATCGTGGAACTCAATATAATTTCAAAAGCTTTGGCTGA 3051 0.3812 MLLSRLFWSICCIVLFLLFTSNFLNKSASALENNTDYSALLKFKESISSDPFGVLTSWNSSTHFCMWHGVTCGHRHQRVIKIKLVGYKLQGSISPHVGNLSFLRILYLDDNSFQANVPRELGRLFRLQAISLANNTLEGQFPISLTNCSQLRKINLYENHLIGQIPMEIHSLAKLEFFKVARNNLTGRIPPSIWNLSSLTILSFSANYLEGNIPEEVGLLKNLTKMSASRNKLSGKLPLSLYNISSLAYLHIGGNQFNGSLPTNMFTTLPNLRHFWVGSNRFSGLIPTSINNASRIQMFDIGLNNFEGQIPNLGKLQDLSVLAVAENNLGSNSSSSGDDWEFIKSLVNCSQLYIVIVESNNFGGALPKIIGNLSTHLSTLAMAGNQISGKIPTELGNLVNLIFLSLANNLLTDVIPESFAKFQNLQVLSLHINRLSGEIPATFLVNLSHLSQLDLANNLFIGKIPSTIGNCKQLQIVDFSMNNLSGTIPTQLLSLSYLSLLLNLSHNSLSGNLPPEVGKLQTIGTLDISENHLSGGIPENIGDCLSLEYLFLEGNSFDGIIPSSLALLKGLLQLDLSRNNLSGSIPQELQKNSVLELFNASFNKLEGEVPMLGVFQNASRVSLTGNNRLCGGVAKLNLQLCPPKNVKKRKHHIRRKLIIIFSIAFLLLVSFVATIIIYQIMRKRQRKASTDSTIEQLPKVSYQELHHATDGFSVQNLIGTGGTGFVYKGRLNSEERVVAVKVLNLQKKGAHKSFLAECNAFRNIRHRNLVKIITCCSSVDHKGDDFKAIVYEYMTNGSLEEWLHQNAEHQRTLKFEKRLEIVNGIASALHYLHNECEKPIVHCDLKPSNVLLDDDMVAHVSDFGLARLVSTIDGKSNNQTSSMGIKGTIGYTPPEYGMDTQLSTEGDMYSFGILLLEMMTGRRPTDEMFKDGYNLHNYVKIAFPNNILEIVDATLFSEENDLLAVTTEVASDLNRNVERFLSSLFKRIILFSGVSKRKNQYQGCHRGTQYNFKSFG* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3244 1016 Gene3D Ribonuclease Inhibitor 33 191 IPR032675 -
Mtr1g3244 1016 SUPERFAMILY L domain-like 33 329 - -
Mtr1g3244 1016 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Mtr1g3244 1016 Gene3D Ribonuclease Inhibitor 196 334 IPR032675 -
Mtr1g3244 1016 Pfam Protein kinase domain 713 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3244 1016 Gene3D Ribonuclease Inhibitor 335 650 IPR032675 -
Mtr1g3244 1016 SMART LRR_typ_2 269 292 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 398 421 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 447 471 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 422 446 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 568 592 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 196 220 IPR003591 -
Mtr1g3244 1016 SMART LRR_typ_2 100 124 IPR003591 -
Mtr1g3244 1016 Gene3D Phosphorylase Kinase; domain 1 673 793 - -
Mtr1g3244 1016 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Mtr1g3244 1016 SUPERFAMILY Protein kinase-like (PK-like) 690 945 IPR011009 -
Mtr1g3244 1016 PANTHER OS04G0122200 PROTEIN 23 999 - -
Mtr1g3244 1016 Gene3D Transferase(Phosphotransferase) domain 1 794 983 - -
Mtr1g3244 1016 Pfam Leucine rich repeat 404 459 IPR001611 GO:0005515
Mtr1g3244 1016 SUPERFAMILY L domain-like 347 631 - -
Mtr1g3244 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Mtr1g3244 1016 SMART serkin_6 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3244 1016 ProSiteProfiles Protein kinase domain profile. 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g3244 1016 PANTHER LRR RECEPTOR-LIKE KINASE 23 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3244 Mtr-Chr1 43709933 43714188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3244 33 956 Receptor kinase-like Gene Family AT3G47570 46.852 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr1g3244 Pkinase 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3244 - - mtr:MTR_1g088940 1625.14