Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3232 ATGGCAACAATAAAAGTGCACGGAAGCCCTATCTCAACGGCCACCATGCGGGTTACTGCAACTTTGTATGAAAAGGAGCTTGAATTTGAGTTTGTAAGCATTAACATGAGGAATGGTGAACACAAAAAGGAACCCTTCATATCACTCAATCCATTTGGTCAAGTTCCAGCTTTTGAAGATGGAGATTTAAAACTCTTTGAGTCAAGGGCGATAACACAATATATTGATCATGAGTATGCTGATAAGGGGACTAAGTTAACAAGCAGTGACTCCAAGAAGATGGCAATAATGAGTGTGTGGTCTGAAGTGGAAAGCCTACACTACGATCAAGTAGCATCAATACTTGTTTGGGAATTGGGGATAAAGACTTTATTTGGAATTCCTTTGGATTCAAATGTTGTGGAAGAGAATGAAGCCAAGTTGGATATCATTCTTGATGTGTATGAGAAAAGATTGTCTAAATCTAAATACTTGGGAGGTGACTCTTTCACCTTGGTGGATCTGCATCACTTACCCTCCCTTTATTACTTGATGAAGTCACAGAGCAAGAAATTGTTTGAATCAAGACCTTATGTTAGTGCTTGGGTGGCTGATATCACTGCAAGACCAGCTTGGTCTAAAGTCCTTGCCATGATACCTAATTAA 645 0.3953 MATIKVHGSPISTATMRVTATLYEKELEFEFVSINMRNGEHKKEPFISLNPFGQVPAFEDGDLKLFESRAITQYIDHEYADKGTKLTSSDSKKMAIMSVWSEVESLHYDQVASILVWELGIKTLFGIPLDSNVVEENEAKLDIILDVYEKRLSKSKYLGGDSFTLVDLHHLPSLYYLMKSQSKKLFESRPYVSAWVADITARPAWSKVLAMIPN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3232 214 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Mtr1g3232 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Mtr1g3232 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 212 - -
Mtr1g3232 214 CDD GST_N_Phi 3 77 - -
Mtr1g3232 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 212 - -
Mtr1g3232 214 Gene3D - 89 214 - -
Mtr1g3232 214 CDD GST_C_Phi 92 209 IPR034347 -
Mtr1g3232 214 SFLD Main (cytGST) 1 211 - -
Mtr1g3232 214 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Mtr1g3232 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Mtr1g3232 214 SFLD Main.5: Phi-like 1 211 - -
Mtr1g3232 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Mtr1g3232 214 Pfam Glutathione S-transferase, C-terminal domain 130 203 IPR004046 -
Mtr1g3232 214 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3232 Mtr-Chr1 43606158 43607315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3232 1 209 Glutathione S-transferase Gene Family AT1G02920 61.722 3.47e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3232 K00799 - gmx:100799868 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3232 1 43606158 43607315 Mtr1g3232 1 43606158 43607315 ECH